RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CLPPQ16740 277 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-222ENST00000493919 FAM110CQ1W6H9 321 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 NYAP1Q6ZVC0 841 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 TADA2BQ86TJ2 420 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 UHMK1Q8TAS1 419 aaKnown RBP12.89□□□□□ -0.35
BRCA1-222ENST00000493919 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 GMCL1Q96IK5 515 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 RGL1Q9NZL6 768 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 RLFQ13129 1914 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 SEC24BO95487 1268 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 PDHBP11177 359 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 STAT2P52630 851 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 LAMB3Q13751 1172 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 KIF22Q14807 665 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 SEC23AQ15436 765 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 PACS1Q6VY07 963 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 ATP11CQ8NB49 1132 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 N4BP2L2Q92802 583 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 SENP2Q9HC62 589 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 COL11A1P12107 1806 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 MTRF1O75570 445 aaKnown RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 PARNO95453 639 aaKnown RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 CPA1P15085 419 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 DSG3P32926 999 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 ACTN2P35609 894 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 LACTBP83111 547 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 DCAF4Q8WV16 495 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 UIMC1Q96RL1 719 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 ARHGAP39Q9C0H5 1083 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
BRCA1-222ENST00000493919 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
BRCA1-222ENST00000493919 EME2A4GXA9 379 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-222ENST00000493919 ATP8B1O43520 1251 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 GOLGA8HP0CJ92 632 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
BRCA1-222ENST00000493919 EIF4BP23588 611 aaKnown RBP12.87□□□□□ -0.35
BRCA1-222ENST00000493919 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 ERVK-24P63145 666 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 MPP3Q13368 585 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 PLS1Q14651 629 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 LRRC31Q6UY01 552 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
BRCA1-222ENST00000493919 MFN1Q8IWA4 741 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 CCAR1Q8IX12 1150 aaKnown RBP12.87□□□□□ -0.35
BRCA1-222ENST00000493919 PEX5LQ8IYB4 626 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 B4GALNT2Q8NHY0 566 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 SNX21Q969T3 373 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
BRCA1-222ENST00000493919 COMMD8Q9NX08 183 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 MKS1Q9NXB0 559 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 ITGB1BP2Q9UKP3 347 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
BRCA1-222ENST00000493919 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-222ENST00000493919 GPRC5AQ8NFJ5 357 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 TMEM87BQ96K49 555 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 MYL10Q9BUA6 226 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 LY9Q9HBG7 655 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 BTBD7Q9P203 1132 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 RBPJLQ9UBG7 517 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 RABGAP1Q9Y3P9 1069 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 TRIM17Q9Y577 477 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 BRCA2P51587 3418 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 PABPN1LA6NDY0 278 aaKnown RBP12.86□□□□□ -0.35
BRCA1-222ENST00000493919 CCDC69A6NI79 296 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 MYCLP1P12525 358 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-222ENST00000493919 PSMA5P28066 241 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 SLC16A2P36021 539 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 PSMC4P43686 418 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 CAP1Q01518 475 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 ZNF543Q08ER8 600 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 TTBK2Q6IQ55 1244 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
BRCA1-222ENST00000493919 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 ANKS1AQ92625 1134 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 DDX12PQ92771 950 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 DTNBP1Q96EV8 351 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 MORF4L1Q9UBU8 362 aa12.86□□□□□ -0.35
BRCA1-222ENST00000493919 MGAMO43451 1857 aa12.85□□□□□ -0.35
BRCA1-222ENST00000493919 VWA5AO00534 786 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms