RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 MYH13Q9UKX3 1938 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 RFX7Q2KHR2 1363 aa7.83□□□□□ -1.16
TRA2B-216ENST00000493864 MAST3O60307 1309 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 SART1O43290 800 aaKnown RBP7.82□□□□□ -1.16
TRA2B-216ENST00000493864 SLFN14P0C7P3 912 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 DRD2P14416 443 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 FKBP1AP62942 108 aaKnown RBP7.82□□□□□ -1.16
TRA2B-216ENST00000493864 PTH1RQ03431 593 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 PTPN11Q06124 597 aaPredicted RBP7.82□□□□□ -1.16
TRA2B-216ENST00000493864 CAMK2GQ13555 558 aaPredicted RBP7.82□□□□□ -1.16
TRA2B-216ENST00000493864 CIAPIN1Q6FI81 312 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 DZIP1Q86YF9 867 aaKnown RBP7.82□□□□□ -1.16
TRA2B-216ENST00000493864 MIGA1Q8NAN2 632 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 SMG8Q8ND04 991 aaKnown RBP7.82□□□□□ -1.16
TRA2B-216ENST00000493864 GAL3ST3Q96A11 431 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 RHOVQ96L33 236 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 GMLQ99445 158 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 LSG1Q9H089 658 aaKnown RBP7.82□□□□□ -1.16
TRA2B-216ENST00000493864 ARMT1Q9H993 441 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 NMRK2Q9NPI5 230 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 PCDHA4Q9UN74 947 aa7.82□□□□□ -1.16
TRA2B-216ENST00000493864 DOCK2Q92608 1830 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 FZD9O00144 591 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 GPAA1O43292 621 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 PRKAB2O43741 272 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 MBD4O95243 580 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 LDHCP07864 332 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 GATA4P43694 442 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 PREPP48147 710 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 GSTO1P78417 241 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 LMNB2Q03252 620 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 TNIP1Q15025 636 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 KIF4BQ2VIQ3 1234 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 VPS53Q5VIR6 699 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 Q6ZS46 218 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 KIAA0825Q8IV33 1275 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 MEGF10Q96KG7 1140 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 UBL7Q96S82 380 aaPredicted RBP7.81□□□□□ -1.16
TRA2B-216ENST00000493864 STRBPQ96SI9 672 aaKnown RBP7.81□□□□□ -1.16
TRA2B-216ENST00000493864 CACNA2D2Q9NY47 1150 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 AP4E1Q9UPM8 1137 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 SUGT1Q9Y2Z0 365 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 MYH7P12883 1935 aa7.81□□□□□ -1.16
TRA2B-216ENST00000493864 CCDC171Q6TFL3 1326 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 FOXP2O15409 715 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 IGSF3O75054 1194 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 REC8O95072 547 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 ITGB2P05107 769 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 ADH5P11766 374 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 EIF4A3P38919 411 aaKnown RBP7.8□□□□□ -1.16
TRA2B-216ENST00000493864 EIF6P56537 245 aaKnown RBP7.8□□□□□ -1.16
TRA2B-216ENST00000493864 SOX4Q06945 474 aaPredicted RBP7.8□□□□□ -1.16
TRA2B-216ENST00000493864 SNAP47Q5SQN1 464 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 SCARA3Q6AZY7 606 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
TRA2B-216ENST00000493864 BNC2Q6ZN30 1099 aaPredicted RBP7.8□□□□□ -1.16
TRA2B-216ENST00000493864 TRIM42Q8IWZ5 723 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 LCORLQ8N3X6 602 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 GOLM1Q8NBJ4 401 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 MAP4K1Q92918 833 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 RIOK1Q9BRS2 568 aaKnown RBP7.8□□□□□ -1.16
TRA2B-216ENST00000493864 MRIQ9BWK5 157 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 DDX41Q9UJV9 622 aaKnown RBP7.8□□□□□ -1.16
TRA2B-216ENST00000493864 PPP1R9AQ9ULJ8 1098 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 PCDHAC2Q9Y5I4 1007 aa7.8□□□□□ -1.16
TRA2B-216ENST00000493864 MROH7-TTC4A0A0A0MT08 1334 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 RAD50Q92878 1312 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 ZNF541Q9H0D2 1346 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 POLR2AP24928 1970 aaKnown RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 WDR90Q96KV7 1748 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 GPR75-ASB3A0A0A6YYF3 556 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 SHTN1A0MZ66 631 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 GSG1L2A8MUP6 293 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 GAS2O43903 313 aaKnown RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 EIF5BO60841 1220 aaKnown RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 TIAF1O95411 115 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 APPP05067 770 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 HSPD1P10809 573 aaKnown RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 ERCC5P28715 1186 aaPredicted RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 BTDP43251 543 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 CRKP46108 304 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 GMPSP49915 693 aaPredicted RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 RACK1P63244 317 aaKnown RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 ID3Q02535 119 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 TMED8Q6PL24 325 aaPredicted RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 HHIPL2Q6UWX4 724 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 DYMQ7RTS9 669 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 AGBL3Q8NEM8 1001 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 SH3RF3Q8TEJ3 882 aaPredicted RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 TEKT1Q969V4 418 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 C22orf23Q9BZE7 217 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 IGSF5Q9NSI5 407 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 AATFQ9NY61 560 aaKnown RBP eCLIP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 ADAMTS1Q9UHI8 967 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 DAGLAQ9Y4D2 1042 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 RBM8AQ9Y5S9 174 aaKnown RBP7.79□□□□□ -1.16
TRA2B-216ENST00000493864 CSADQ9Y600 493 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 SLC4A4Q9Y6R1 1079 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms