RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 KLHL36Q8N4N3 616 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 TMEM145Q8NBT3 493 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 KREMEN2Q8NCW0 462 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.01□□□□□ -1.296e-8■■■■□ 23.9
SMC4-223ENST00000493695 ZCCHC14Q8WYQ9 949 aaKnown RBP7.01□□□□□ -1.29
SMC4-223ENST00000493695 CAPN10Q9HC96 672 aa7.01□□□□□ -1.29
SMC4-223ENST00000493695 AGRPO00253 132 aa7□□□□□ -1.29
SMC4-223ENST00000493695 ACBD5Q5T8D3 534 aaPredicted RBP7□□□□□ -1.29
SMC4-223ENST00000493695 SLFN13Q68D06 897 aa7□□□□□ -1.29
SMC4-223ENST00000493695 VASNQ6EMK4 673 aa7□□□□□ -1.29
SMC4-223ENST00000493695 VPS37DQ86XT2 251 aa7□□□□□ -1.29
SMC4-223ENST00000493695 JAM3Q9BX67 310 aa7□□□□□ -1.29
SMC4-223ENST00000493695 TGIF2Q9GZN2 237 aa7□□□□□ -1.29
SMC4-223ENST00000493695 HS3ST3A1Q9Y663 406 aa7□□□□□ -1.29
SMC4-223ENST00000493695 SLC27A2O14975 620 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 MUSKO15146 869 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 TADA3O75528 432 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 GFRA1P56159 465 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 TNNI3KQ59H18 835 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 HOMEZQ8IX15 550 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 MBD6Q96DN6 1003 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 ZNF341Q9BYN7 854 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 SMOC1Q9H4F8 434 aa6.99□□□□□ -1.29
SMC4-223ENST00000493695 ZNF623O75123 536 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 SCG5P05408 212 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 GLRBP48167 497 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 SELENOPP49908 381 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 EPHB4P54760 987 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 CDSNQ15517 529 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 FXNQ16595 210 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 EMC4Q5J8M3 183 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 RALYLQ86SE5 291 aaKnown RBP6.98□□□□□ -1.29
SMC4-223ENST00000493695 TRIM48Q8IWZ4 208 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 PHOSPHO1Q8TCT1 267 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 ZNF747Q9BV97 191 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 CD248Q9HCU0 757 aa6.98□□□□□ -1.29
SMC4-223ENST00000493695 CYR61O00622 381 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 ATF4P18848 351 aaPredicted RBP6.97□□□□□ -1.29
SMC4-223ENST00000493695 HS1BP3Q53T59 392 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 SPDYAQ5MJ70 313 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 CRIP3Q6Q6R5 217 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 USP53Q70EK8 1073 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 RBM12BQ8IXT5 1001 aaKnown RBP6.97□□□□□ -1.29
SMC4-223ENST00000493695 Q8N1X5 172 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 GIMAP8Q8ND71 665 aaPredicted RBP6.97□□□□□ -1.29
SMC4-223ENST00000493695 NUDT10Q8NFP7 164 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 PIP4K2CQ8TBX8 421 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 NUDT11Q96G61 164 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 LRRC37BQ96QE4 947 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 WASF3Q9UPY6 502 aa6.97□□□□□ -1.29
SMC4-223ENST00000493695 SLPIP03973 132 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 DENND5AQ6IQ26 1287 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 PKN3Q6P5Z2 889 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 EEPD1Q7L9B9 569 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 GPR155Q7Z3F1 870 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 IFNL2Q8IZJ0 200 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 KCTD13Q8WZ19 329 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 GNRHR2Q96P88 292 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 ASH2LQ9UBL3 628 aa6.96□□□□□ -1.3
SMC4-223ENST00000493695 R3HCC1Q9Y3T6 440 aaKnown RBP6.96□□□□□ -1.3
SMC4-223ENST00000493695 GRIA2P42262 883 aa6.95□□□□□ -1.3
SMC4-223ENST00000493695 SMAD2Q15796 467 aaKnown RBP6.95□□□□□ -1.3
SMC4-223ENST00000493695 KCNJ15Q99712 375 aa6.95□□□□□ -1.3
SMC4-223ENST00000493695 IER2Q9BTL4 223 aa6.95□□□□□ -1.3
SMC4-223ENST00000493695 DLL4Q9NR61 685 aa6.95□□□□□ -1.3
SMC4-223ENST00000493695 OVOL3O00110 214 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 COL6A2P12110 1019 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 ZNF568Q3ZCX4 644 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 DNERQ8NFT8 737 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 MICAL1Q8TDZ2 1067 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 LMF1Q96S06 567 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 SEMA4AQ9H3S1 761 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 SLC6A20Q9NP91 592 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 ARHGAP20Q9P2F6 1191 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 PPARGC1AQ9UBK2 798 aaKnown RBP6.94□□□□□ -1.3
SMC4-223ENST00000493695 ZFP69BQ9UJL9 534 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 ADAM29Q9UKF5 820 aa6.94□□□□□ -1.3
SMC4-223ENST00000493695 PATE3B3GLJ2 98 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 CKMP06732 381 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 GNAT1P11488 350 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 ACVRL1P37023 503 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 PPP2R2AP63151 447 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 MRM1Q6IN84 353 aaKnown RBP6.93□□□□□ -1.3
SMC4-223ENST00000493695 STPG3Q8N7X2 389 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 CLEC4DQ8WXI8 215 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMC4-223ENST00000493695 MENTQ9BUN1 341 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 PRKAG3Q9UGI9 489 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 NUB1Q9Y5A7 615 aa6.93□□□□□ -1.3
SMC4-223ENST00000493695 GJB6O95452 261 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 LTFP02788 710 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 ETFBP38117 255 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 SPIRE1Q08AE8 756 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 TUSC3Q13454 348 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 TESK1Q15569 626 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 SKIDA1Q1XH10 827 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 SLC35F1Q5T1Q4 408 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 CYP4F22Q6NT55 531 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 Q6ZUG5 572 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms