RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 ZMYND12Q9H0C1 365 aa10.79□□□□□ -0.68
SGIP1-213ENST00000493564 GLT8D2Q9H1C3 349 aa10.79□□□□□ -0.68
SGIP1-213ENST00000493564 HIPK3Q9H422 1215 aa10.79□□□□□ -0.68
SGIP1-213ENST00000493564 JADE2Q9NQC1 790 aa10.79□□□□□ -0.68
SGIP1-213ENST00000493564 HDAC6Q9UBN7 1215 aa10.79□□□□□ -0.68
SGIP1-213ENST00000493564 SZT2Q5T011 3432 aa10.79□□□□□ -0.68
SGIP1-213ENST00000493564 CTDNEP1O95476 244 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 KCNA2P16389 499 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 GNA11P29992 359 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 FPGSQ05932 587 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 ANKRD1Q15327 319 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 PTGISQ16647 500 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 KIAA0753Q2KHM9 967 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
SGIP1-213ENST00000493564 NFRKBQ6P4R8 1299 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 METTL7BQ6UX53 244 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 C16orf59Q7L2K0 433 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 REXO1Q8N1G1 1221 aaKnown RBP10.78□□□□□ -0.68
SGIP1-213ENST00000493564 C7orf31Q8N865 590 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 CCDC12Q8WUD4 166 aaPredicted RBP10.78□□□□□ -0.68
SGIP1-213ENST00000493564 GPRASP2Q96D09 838 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 IL17RAQ96F46 866 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 SCLYQ96I15 445 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 GPR20Q99678 358 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 C16orf70Q9BSU1 422 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 NOC4LQ9BVI4 516 aaKnown RBP10.78□□□□□ -0.68
SGIP1-213ENST00000493564 C22orf23Q9BZE7 217 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 KCNH7Q9NS40 1196 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 GJB4Q9NTQ9 266 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 KCNJ14Q9UNX9 436 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 NOD1Q9Y239 953 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 LAMA3Q16787 3333 aa10.78□□□□□ -0.68
SGIP1-213ENST00000493564 DOCK5Q9H7D0 1870 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 A0A1W2PPC1 479 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 GSTTP1A0A1W2PQM5 241 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 ESYT2A0FGR8 921 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 FAM86B1E9PN63 330 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 H3BRB1 525 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 DDX39AO00148 427 aaKnown RBP10.77□□□□□ -0.69
SGIP1-213ENST00000493564 DEXIO95424 95 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 LGALS2P05162 132 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 FAM86B2P0C5J1 330 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 SUPT20HL2P0C7V6 817 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 SREBF1P36956 1147 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 AP3B2Q13367 1082 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 HIC1Q14526 733 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 CEP55Q53EZ4 464 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 TRIM50Q86XT4 487 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 TMEM199Q8N511 208 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 CDHR1Q96JP9 859 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 SENP7Q9BQF6 1050 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 SEZ6LQ9BYH1 1024 aa10.77□□□□□ -0.69
SGIP1-213ENST00000493564 TUT1Q9H6E5 874 aaKnown RBP10.77□□□□□ -0.69
SGIP1-213ENST00000493564 AGO4Q9HCK5 861 aaKnown RBP10.77□□□□□ -0.69
SGIP1-213ENST00000493564 HAS3O00219 553 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 MEIS1O00470 390 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 CDKL5O76039 1030 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 F2P00734 622 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 HOXD8P13378 290 aaPredicted RBP10.76□□□□□ -0.69
SGIP1-213ENST00000493564 TCF7P36402 384 aaPredicted RBP10.76□□□□□ -0.69
SGIP1-213ENST00000493564 FOSBP53539 338 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 PTPN11Q06124 597 aaPredicted RBP10.76□□□□□ -0.69
SGIP1-213ENST00000493564 ZNF365Q70YC5 407 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 DEFB128Q7Z7B8 93 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 GIMAP8Q8ND71 665 aaPredicted RBP10.76□□□□□ -0.69
SGIP1-213ENST00000493564 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 BICD2Q8TD16 824 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 SEPT1Q8WYJ6 367 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 KIF2CQ99661 725 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.76□□□□□ -0.69
SGIP1-213ENST00000493564 KATNAL1Q9BW62 490 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 WNT8AQ9H1J5 351 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 RNPEPQ9H4A4 650 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 SH3GLB2Q9NR46 395 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 ORC3Q9UBD5 711 aaPredicted RBP10.76□□□□□ -0.69
SGIP1-213ENST00000493564 GTF2IRD1Q9UHL9 959 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 SCN10AQ9Y5Y9 1956 aa10.76□□□□□ -0.69
SGIP1-213ENST00000493564 LTBP2Q14767 1821 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 MAFGO15525 162 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 EDIL3O43854 480 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 JAK2O60674 1132 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 CYP3A4P08684 503 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 SMIM10L2AP0DMW4 78 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 SMIM10L2BP0DMW5 78 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 FDPSP14324 419 aaKnown RBP10.75□□□□□ -0.69
SGIP1-213ENST00000493564 MARK3P27448 753 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 ITGB3BPQ13352 177 aaPredicted RBP10.75□□□□□ -0.69
SGIP1-213ENST00000493564 PPIGQ13427 754 aaKnown RBP eCLIP10.75□□□□□ -0.69
SGIP1-213ENST00000493564 LRIT3Q3SXY7 679 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 PRR16Q569H4 304 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 TMEM240Q5SV17 173 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 BLIDQ8IZY5 108 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 RETREG2Q8NC44 543 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 CRYGNQ8WXF5 182 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 RNPC3Q96LT9 517 aaKnown RBP10.75□□□□□ -0.69
SGIP1-213ENST00000493564 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms