RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 CLIC6Q96NY7 704 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 CSRNP2Q9H175 543 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 SH2D4AQ9H788 454 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 NDFIP2Q9NV92 336 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 MYH1P12882 1939 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 MYH6P13533 1939 aa11.33□□□□□ -0.6
PRPF3-206ENST00000493553 SMCO2A6NFE2 343 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 DKK1O94907 266 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 PPP1R2P41236 205 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 ZNF174Q15697 407 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 SLC4A8Q2Y0W8 1093 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 FIGNL1Q6PIW4 674 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 LYPD4Q6UWN0 246 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 NEK8Q86SG6 692 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 SLC51AQ86UW1 340 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 GMCL1P1Q8NEA9 526 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 SPATA20Q8TB22 786 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 LRRC27Q9C0I9 530 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 ATXN7L1Q9ULK2 861 aaPredicted RBP11.32□□□□□ -0.6
PRPF3-206ENST00000493553 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
PRPF3-206ENST00000493553 FOCADQ5VW36 1801 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 ZBTB5O15062 677 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 CYTH3O43739 400 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
PRPF3-206ENST00000493553 MCM7P33993 719 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 UBA7P41226 1012 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 TNNI2P48788 182 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 CCDC96Q2M329 555 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 TMEM266Q2M3C6 531 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 DALRD3Q5D0E6 543 aaKnown RBP11.31□□□□□ -0.6
PRPF3-206ENST00000493553 C11orf57Q6ZUT1 292 aaPredicted RBP11.31□□□□□ -0.6
PRPF3-206ENST00000493553 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 SLC9A9Q8IVB4 645 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 DHX40Q8IX18 779 aaKnown RBP11.31□□□□□ -0.6
PRPF3-206ENST00000493553 AOPEPQ8N6M6 819 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 FAM151AQ8WW52 585 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 CUL5Q93034 780 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 MTFR1LQ9H019 292 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 RIC8AQ9NPQ8 531 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
PRPF3-206ENST00000493553 VWA3AA6NCI4 1184 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 FOSP01100 380 aaPredicted RBP11.3□□□□□ -0.6
PRPF3-206ENST00000493553 CELA2BP08218 269 aaPredicted RBP11.3□□□□□ -0.6
PRPF3-206ENST00000493553 OR52Z1P0C646 297 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 DPEP1P16444 411 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 SLC1A4P43007 532 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 MAP2K3P46734 347 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 SARSP49591 514 aaKnown RBP11.3□□□□□ -0.6
PRPF3-206ENST00000493553 TERF1P54274 439 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 AMPD3Q01432 767 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 ICA1Q05084 483 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 NFIAQ12857 509 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 TNFAIP1Q13829 316 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 DPCR1Q3MIW9 517 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
PRPF3-206ENST00000493553 HOOK2Q96ED9 719 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 MTMR8Q96EF0 704 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 PIGSQ96S52 555 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 GMLQ99445 158 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 PNMA2Q9UL42 364 aa11.3□□□□□ -0.6
PRPF3-206ENST00000493553 GOLGA8HP0CJ92 632 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 PNOCQ13519 176 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 MORC3Q14149 939 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 PDIA5Q14554 519 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
PRPF3-206ENST00000493553 SLFN13Q68D06 897 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 HOMER1Q86YM7 354 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 CCDC150Q8NCX0 1101 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 ANKRD20A12PQ8NF67 263 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 RASSF8Q8NHQ8 419 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 PIBF1Q8WXW3 757 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 SHISA4Q96DD7 197 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 CSRNP1Q96S65 589 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 MXD3Q9BW11 206 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 RRAGDQ9NQL2 400 aaPredicted RBP11.29□□□□□ -0.6
PRPF3-206ENST00000493553 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 SLX4Q8IY92 1834 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 LTBP3Q9NS15 1303 aa11.29□□□□□ -0.6
PRPF3-206ENST00000493553 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 A0A1W2PNR3 127 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 BIN1O00499 593 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 BNIP3LO60238 219 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 OFD1O75665 1012 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 NOS2P35228 1153 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 STAT6P42226 847 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 SPAG1Q07617 926 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 STIM1Q13586 685 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 INF2Q27J81 1249 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms