RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SNX21Q969T3 373 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 ZNF577Q9BSK1 485 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 MTG1Q9BT17 334 aaPredicted RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 SEZ6LQ9BYH1 1024 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 AZI2Q9H6S1 392 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 TBC1D22BQ9NU19 505 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 ZNF215Q9UL58 517 aaPredicted RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 UBIAD1Q9Y5Z9 338 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 ARIH2O95376 493 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 CD2BP2O95400 341 aaKnown RBP9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 MMP3P08254 477 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 PRR29P0C7W0 189 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 GCFC2P16383 781 aaKnown RBP9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 FAM47CQ5HY64 1035 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 CCDC62Q6P9F0 684 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 METTL7BQ6UX53 244 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 KLHDC9Q8NEP7 349 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 FBXO18Q8NFZ0 1043 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 AFG1LQ8WV93 481 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 EMID1Q96A84 441 aaPredicted RBP9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 INTS4Q96HW7 963 aaKnown RBP9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 FOXP1Q9H334 677 aaPredicted RBP9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 JPH1Q9HDC5 661 aaPredicted RBP9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 KCNH7Q9NS40 1196 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 SLC9A2Q9UBY0 812 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 DDX25Q9UHL0 483 aaKnown RBP9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 PHF24Q9UPV7 400 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 ATP11BQ9Y2G3 1177 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 SAMM50Q9Y512 469 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 ELP1O95163 1332 aa9.22□□□□□ -0.93
TM4SF1-204ENST00000493348 VPS37CA5D8V6 355 aaPredicted RBP9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 A6NJR5 290 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 BTBD18B2RXH4 712 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 DDX39AO00148 427 aaKnown RBP9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 IPO5O00410 1097 aaKnown RBP9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 MEIS1O00470 390 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 ADCY6O43306 1168 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 GAS7O60861 476 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 PPFIA4O75335 1185 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 RGS20O76081 388 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 ITGB5P18084 799 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 RGS19P49795 217 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 ARHGAP1Q07960 439 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 ST3GAL1Q11201 340 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 NR5A1Q13285 461 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 UTP14CQ5TAP6 766 aaKnown RBP9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 MYSM1Q5VVJ2 828 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 FAM160B1Q5W0V3 765 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 MOXD1Q6UVY6 613 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 CXCL17Q6UXB2 119 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 SLC39A5Q6ZMH5 540 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 GLG1Q92896 1179 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 TEKT3Q9BXF9 490 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 GJB4Q9NTQ9 266 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 NFASCO94856 1347 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 PDE4DIPQ5VU43 2346 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 BRCA2P51587 3418 aa9.21□□□□□ -0.94
TM4SF1-204ENST00000493348 MYADML2A6NDP7 307 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 FAM86B1E9PN63 330 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 BACH1O14867 736 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 PQBP1O60828 265 aaKnown RBP9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 FAM86B2P0C5J1 330 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 ARP10275 920 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 PDIA4P13667 645 aaKnown RBP9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 CIITAP33076 1130 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 RTP1P59025 263 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 KRT76Q01546 638 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 SP2Q02086 613 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 CUL4AQ13619 759 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 ITGA7Q13683 1181 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 Q4G0T1 1027 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 LRCH2Q5VUJ6 765 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 PPP4R3AQ6IN85 833 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 MIS18BP1Q6P0N0 1132 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 NOSTRINQ8IVI9 506 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 SLFN12Q8IYM2 578 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 C7orf61Q8IZ16 206 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 C7orf31Q8N865 590 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 CYP2W1Q8TAV3 490 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 OXER1Q8TDS5 423 aa9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 AGO4Q9HCK5 861 aaKnown RBP9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 PRDM5Q9NQX1 630 aaPredicted RBP9.2□□□□□ -0.94
TM4SF1-204ENST00000493348 WDR64B1ANS9 1081 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 M0R2N6 131 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 ARVCFO00192 962 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 CHMP2AO43633 222 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 NEMFO60524 1076 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 PSAPP07602 524 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 SUPT20HL2P0C7V6 817 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 ZNF286BP0CG31 522 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 GNAT1P11488 350 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 COL6A1P12109 1028 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 KCNA2P16389 499 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 TCF7P36402 384 aaPredicted RBP9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 TRAPPC10P48553 1259 aa9.19□□□□□ -0.94
TM4SF1-204ENST00000493348 PSEN2P49810 448 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms