RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KIAA0895Q8NCT3 520 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 TRIM47Q96LD4 638 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 MXRA8Q9BRK3 442 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 WDR11Q9BZH6 1224 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 SLC39A2Q9NP94 309 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 TMOD4Q9NZQ9 345 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 AFG3L2Q9Y4W6 797 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 TRIM49BA6NDI0 452 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 SSBP05455 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
PTPN7-216ENST00000492977 MUTP22033 750 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 PBX1P40424 430 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 COPB1P53618 953 aaKnown RBP15.65■□□□□ 0.1
PTPN7-216ENST00000492977 HMGCS2P54868 508 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 SLC12A3P55017 1021 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 COG2Q14746 738 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 CENPPQ6IPU0 288 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 FOXR2Q6PJQ5 311 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 IRF2BP1Q8IU81 584 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 RBM46Q8TBY0 533 aaKnown RBP15.65■□□□□ 0.1
PTPN7-216ENST00000492977 ATG4CQ96DT6 458 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 DUSP9Q99956 384 aaKnown RBP15.65■□□□□ 0.1
PTPN7-216ENST00000492977 EIF2AK1Q9BQI3 630 aaKnown RBP15.65■□□□□ 0.1
PTPN7-216ENST00000492977 SRRTQ9BXP5 876 aaKnown RBP15.65■□□□□ 0.1
PTPN7-216ENST00000492977 TUFT1Q9NNX1 390 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 PANK4Q9NVE7 773 aa15.65■□□□□ 0.1
PTPN7-216ENST00000492977 FRMPD4Q14CM0 1322 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 POTEFA5A3E0 1075 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 N4BP3O15049 544 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 TEX33O43247 280 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 GAS7O60861 476 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 YBX3P16989 372 aaKnown RBP eCLIP15.64■□□□□ 0.093e-8■□□□□ 10.5
PTPN7-216ENST00000492977 CYP11B2P19099 503 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 UBXN2AP68543 259 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 MAP3K9P80192 1104 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 COASYQ13057 564 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 MUM1L1Q5H9M0 696 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 SH3D19Q5HYK7 790 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 C9orf131Q5VYM1 1079 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 PCNX4Q63HM2 1172 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 ANKRD40Q6AI12 368 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 POTEGQ6S5H5 508 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 POTEEQ6S8J3 1075 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 CATSPERGQ6ZRH7 1159 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 GPBP1Q86WP2 473 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 SULF1Q8IWU6 871 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 CSGALNACT2Q8N6G5 542 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 SYT2Q8N9I0 419 aaPredicted RBP15.64■□□□□ 0.09
PTPN7-216ENST00000492977 SYTL5Q8TDW5 730 aaPredicted RBP15.64■□□□□ 0.09
PTPN7-216ENST00000492977 TRERF1Q96PN7 1200 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 RIT2Q99578 217 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 HSD17B14Q9BPX1 270 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 ZNF577Q9BSK1 485 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 MAF1Q9H063 256 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 TMX1Q9H3N1 280 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 COL20A1Q9P218 1284 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 MAGEC2Q9UBF1 373 aaPredicted RBP15.64■□□□□ 0.09
PTPN7-216ENST00000492977 FZD1Q9UP38 647 aa15.64■□□□□ 0.09
PTPN7-216ENST00000492977 RBBP6Q7Z6E9 1792 aaKnown RBP15.64■□□□□ 0.09
PTPN7-216ENST00000492977 ITIH6Q6UXX5 1313 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 MYPNQ86TC9 1320 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 EML1O00423 815 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 ATP2A1O14983 1001 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 DNTTIP2Q5QJE6 756 aaKnown RBP15.63■□□□□ 0.09
PTPN7-216ENST00000492977 DPY19L2Q6NUT2 758 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 REPS2Q8NFH8 660 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 HOXC10Q9NYD6 342 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 RLFQ13129 1914 aa15.63■□□□□ 0.09
PTPN7-216ENST00000492977 FRMD3A2A2Y4 597 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 IPO5O00410 1097 aaKnown RBP15.62■□□□□ 0.09
PTPN7-216ENST00000492977 PPP1R12BO60237 982 aaPredicted RBP15.62■□□□□ 0.09
PTPN7-216ENST00000492977 EYA4O95677 639 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 FGFR1OPO95684 399 aaKnown RBP15.62■□□□□ 0.09
PTPN7-216ENST00000492977 ARP10275 920 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 RPS6P62753 249 aaKnown RBP15.62■□□□□ 0.09
PTPN7-216ENST00000492977 LRRC63Q05C16 580 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 ARSHQ5FYA8 562 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 RNF207Q6ZRF8 634 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.62■□□□□ 0.09
PTPN7-216ENST00000492977 HPS3Q969F9 1004 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 TEKT3Q9BXF9 490 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 SEMA6BQ9H3T3 888 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 HOMER2Q9NSB8 354 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.62■□□□□ 0.092e-6■■■■□ 21.1
PTPN7-216ENST00000492977 UBIAD1Q9Y5Z9 338 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 KIF20AO95235 890 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 ITGB5P18084 799 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 TERF1P54274 439 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 PSMC6P62333 389 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 EPHA7Q15375 998 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 TKFCQ3LXA3 575 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 FAM26FQ5R3K3 315 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 XRRA1Q6P2D8 792 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 B3GNT9Q6UX72 402 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 PPFIBP1Q86W92 1011 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 MYOCDQ8IZQ8 938 aa15.62■□□□□ 0.09
PTPN7-216ENST00000492977 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms