RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
MDC1-207ENST00000492462 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 GTF2IRD1Q9UHL9 959 aa13.53□□□□□ -0.24
MDC1-207ENST00000492462 MYO9BQ13459 2157 aa13.52□□□□□ -0.24
MDC1-207ENST00000492462 NCOR1O75376 2440 aa13.52□□□□□ -0.24
MDC1-207ENST00000492462 BDP1A6H8Y1 2624 aa13.52□□□□□ -0.24
MDC1-207ENST00000492462 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 LGALS2P05162 132 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
MDC1-207ENST00000492462 PSMA5P28066 241 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
MDC1-207ENST00000492462 SP4Q02446 784 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 NTRK3Q16288 839 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 PKN1Q16512 942 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.25
MDC1-207ENST00000492462 METTL7BQ6UX53 244 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 RUFY3Q7L099 469 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 OTOP2Q7RTS6 562 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 DEFB128Q7Z7B8 93 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 TRIM50Q86XT4 487 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 WNT8BQ93098 351 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 PHKBQ93100 1093 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 CDX2Q99626 313 aaPredicted RBP13.52□□□□□ -0.25
MDC1-207ENST00000492462 GPR20Q99678 358 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 TTYH1Q9H313 450 aaPredicted RBP13.52□□□□□ -0.25
MDC1-207ENST00000492462 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.25
MDC1-207ENST00000492462 RIC8AQ9NPQ8 531 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 BARHL2Q9NY43 387 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 NOD1Q9Y239 953 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 UBIAD1Q9Y5Z9 338 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 NID2Q14112 1375 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 CHD9Q3L8U1 2897 aa13.52□□□□□ -0.25
MDC1-207ENST00000492462 SMCO2A6NFE2 343 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 EPB41L2O43491 1005 aaKnown RBP13.51□□□□□ -0.25
MDC1-207ENST00000492462 FGBP02675 491 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 IQCF3P0C7M6 154 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 KCNA2P16389 499 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
MDC1-207ENST00000492462 PBX2P40425 430 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 ADCY7P51828 1080 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 NEDD9Q14511 834 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
MDC1-207ENST00000492462 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 C7orf31Q8N865 590 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 CYP2W1Q8TAV3 490 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
MDC1-207ENST00000492462 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.5□□□□□ -0.25
MDC1-207ENST00000492462 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.5□□□□□ -0.25
MDC1-207ENST00000492462 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 NOP56O00567 594 aaKnown RBP13.5□□□□□ -0.25
MDC1-207ENST00000492462 SCG2P13521 617 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 EVCP57679 992 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 GPNMBQ14956 572 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 UTP14CQ5TAP6 766 aaKnown RBP13.5□□□□□ -0.25
MDC1-207ENST00000492462 ZNF697Q5TEC3 545 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 JAKMIP3Q5VZ66 844 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 GPRASP2Q96D09 838 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 SENP7Q9BQF6 1050 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 KATNAL1Q9BW62 490 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 ANO3Q9BYT9 981 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 SEMA6BQ9H3T3 888 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
MDC1-207ENST00000492462 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 H3BRB1 525 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
MDC1-207ENST00000492462 DNAJB2P25686 324 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 CLK2P49760 499 aaKnown RBP13.49□□□□□ -0.25
MDC1-207ENST00000492462 BFSP2Q13515 415 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
MDC1-207ENST00000492462 RETREG2Q8NC44 543 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 SLC26A6Q9BXS9 759 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 PBX4Q9BYU1 374 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 TM6SF1Q9BZW5 370 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 TUT1Q9H6E5 874 aaKnown RBP13.49□□□□□ -0.25
MDC1-207ENST00000492462 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
MDC1-207ENST00000492462 GSTTP1A0A1W2PQM5 241 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 hCG_1984214I3L0E3 225 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 DTNBO60941 627 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 SMIM10L2AP0DMW4 78 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 SMIM10L2BP0DMW5 78 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 ARP10275 920 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 MTMR1Q13613 665 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 TRAF7Q6Q0C0 670 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 RPUSD2Q8IZ73 545 aaKnown RBP13.48□□□□□ -0.25
MDC1-207ENST00000492462 ZNF713Q8N859 430 aaPredicted RBP13.48□□□□□ -0.25
MDC1-207ENST00000492462 RASGRP4Q8TDF6 673 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 UIMC1Q96RL1 719 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 MXRA8Q9BRK3 442 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 KCNH7Q9NS40 1196 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 ARIH1Q9Y4X5 557 aaPredicted RBP13.48□□□□□ -0.25
MDC1-207ENST00000492462 PTPRSQ13332 1948 aa13.48□□□□□ -0.25
MDC1-207ENST00000492462 ZBBXA8MT70 800 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 FOSP01100 380 aaPredicted RBP13.47□□□□□ -0.25
MDC1-207ENST00000492462 CKBP12277 381 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 SELPP16109 830 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms