RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 NCK2O43639 380 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 TMCC1O94876 653 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 AFMP43652 599 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 CCDC152Q4G0S7 254 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 TMC3Q7Z5M5 1100 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 HOOK3Q86VS8 718 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 FAM114A1Q8IWE2 563 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 STKLD1Q8NE28 680 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 MDM1Q8TC05 714 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 WASF1Q92558 559 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
VPS8-225ENST00000492449 SLC35B4Q969S0 331 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 TXLNGYQ9BZA5 131 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 EXOC1Q9NV70 894 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 RMND1Q9NWS8 449 aa10.6□□□□□ -0.71
VPS8-225ENST00000492449 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
VPS8-225ENST00000492449 GSTT1P30711 240 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 RAD23BP54727 409 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 NOX5Q96PH1 765 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 FAM114A2Q9NRY5 505 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 PAG1Q9NWQ8 432 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 FOXP2O15409 715 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 RNF113AO15541 343 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 EIF4BP23588 611 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 LSAMPQ13449 338 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 KRT71Q3SY84 523 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 SFMBT2Q5VUG0 894 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 TBC1D16Q8TBP0 767 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 PIGOQ8TEQ8 1089 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 ZNF333Q96JL9 665 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 TMEM237Q96Q45 408 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 ERGIC2Q96RQ1 377 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 EYA1Q99502 592 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 PYM1Q9BRP8 204 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 ESF1Q9H501 851 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 VPS54Q9P1Q0 977 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 ANGEL1Q9UNK9 670 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 PCDHB6Q9Y5E3 794 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 NDUFB9Q9Y6M9 179 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 PLEKHG1Q9ULL1 1385 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 XDHP47989 1333 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 RANBP6O60518 1105 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 SUN1O94901 812 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 NUDT17P0C025 328 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 ZNF24P17028 368 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 TRIM21P19474 475 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 YY1P25490 414 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 RFX5P48382 616 aaPredicted RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 KIF11P52732 1056 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 MPP3Q13368 585 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 WASHC2DQ5SRD0 308 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 UTP4Q969X6 686 aaKnown RBP10.59□□□□□ -0.71
VPS8-225ENST00000492449 PHACTR1Q9C0D0 580 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 PRKAG3Q9UGI9 489 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 STK38LQ9Y2H1 464 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 COMMD3-BMI1R4GMX3 469 aa10.59□□□□□ -0.71
VPS8-225ENST00000492449 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 LRP6O75581 1613 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 LMNAP02545 664 aaKnown RBP10.58□□□□□ -0.72
VPS8-225ENST00000492449 FAM200BP0CF97 657 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
VPS8-225ENST00000492449 SH2D4BQ5SQS7 431 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 KRT26Q7Z3Y9 468 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 UBLCP1Q8WVY7 318 aaPredicted RBP10.58□□□□□ -0.72
VPS8-225ENST00000492449 C17orf50Q8WW18 174 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 GATA6Q92908 595 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 FERMT2Q96AC1 680 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 PSMB7Q99436 277 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 ARHGAP20Q9P2F6 1191 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 BZW2Q9Y6E2 419 aaKnown RBP10.58□□□□□ -0.72
VPS8-225ENST00000492449 COL22A1Q8NFW1 1626 aaPredicted RBP10.58□□□□□ -0.72
VPS8-225ENST00000492449 MAGEA13PA6NCF6 341 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 EIF4E1BA6NMX2 242 aaKnown RBP10.58□□□□□ -0.72
VPS8-225ENST00000492449 BTBD18B2RXH4 712 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 RBAK-RBAKDNI3L0D1 243 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 ECE2O60344 883 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 ATP5HO75947 161 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 UNC5CO95185 931 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 CASP1P29466 404 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 PHEXP78562 749 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 TFCP2Q12800 502 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 CWF19L2Q2TBE0 894 aaKnown RBP10.58□□□□□ -0.72
VPS8-225ENST00000492449 MEI1Q5TIA1 1274 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 APOA5Q6Q788 366 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 MAEAQ7L5Y9 396 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 KIF2BQ8N4N8 673 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 LPIN2Q92539 896 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 MTMR8Q96EF0 704 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 DBNDD2Q9BQY9 259 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 NEUROG2Q9H2A3 272 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 LRMDAQ9H2I8 198 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 PNMA2Q9UL42 364 aa10.58□□□□□ -0.72
VPS8-225ENST00000492449 PNPLA7Q6ZV29 1317 aa10.57□□□□□ -0.72
VPS8-225ENST00000492449 IDO1P14902 403 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms