RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
HDAC3-212ENST00000492407 MUC3AQ02505 3323 aa10.55□□□□□ -0.72
HDAC3-212ENST00000492407 EPOPA6NHQ4 379 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 RFXAPO00287 272 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 NOP56O00567 594 aaKnown RBP10.54□□□□□ -0.72
HDAC3-212ENST00000492407 SGSM2O43147 1006 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 LPXNO60711 386 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 ZNF286BP0CG31 522 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 PDE4AP27815 886 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 HTRA4P83105 476 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-212ENST00000492407 SKIV2LQ15477 1246 aaKnown RBP10.54□□□□□ -0.72
HDAC3-212ENST00000492407 SLC35G1Q2M3R5 365 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 PLEKHG4Q58EX7 1191 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 PCNX4Q63HM2 1172 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 RPAINQ86UA6 219 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 HOMER1Q86YM7 354 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 SP7Q8TDD2 431 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-212ENST00000492407 PPP1R13LQ8WUF5 828 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 APBB2Q92870 758 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 CUL5Q93034 780 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 ATP6V0A1Q93050 837 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 RRP36Q96EU6 259 aaKnown RBP10.54□□□□□ -0.72
HDAC3-212ENST00000492407 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 TANC1Q9C0D5 1861 aa10.54□□□□□ -0.72
HDAC3-212ENST00000492407 ZNF215Q9UL58 517 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-212ENST00000492407 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 MAFGO15525 162 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 ARHGEF15O94989 841 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 LGALS2P05162 132 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
HDAC3-212ENST00000492407 SMIM10L2AP0DMW4 78 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 SMIM10L2BP0DMW5 78 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 CALM1P0DP23 149 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 CALM2P0DP24 149 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 CALM3P0DP25 149 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 THPOP40225 353 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 DEFB103AP81534 67 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 MRPS9P82933 396 aaKnown RBP10.53□□□□□ -0.72
HDAC3-212ENST00000492407 PTH1RQ03431 593 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 MBTPS1Q14703 1052 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 NLRX1Q86UT6 975 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 FCHSD1Q86WN1 690 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 DBF4BQ8NFT6 615 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 IL31RAQ8NI17 732 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-212ENST00000492407 SEPT8Q92599 483 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 TMEM87BQ96K49 555 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 GPR20Q99678 358 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 RNPEPQ9H4A4 650 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 CERS4Q9HA82 394 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-212ENST00000492407 NRCAMQ92823 1304 aa10.53□□□□□ -0.72
HDAC3-212ENST00000492407 BDP1A6H8Y1 2624 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-212ENST00000492407 LCHNA4D1U4 455 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 COL9A1P20849 921 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 LIFRP42702 1097 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 ADAM17P78536 824 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 RBM10P98175 930 aaKnown RBP10.52□□□□□ -0.73
HDAC3-212ENST00000492407 ZNF200P98182 395 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-212ENST00000492407 HIC1Q14526 733 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 PUS10Q3MIT2 529 aaKnown RBP10.52□□□□□ -0.73
HDAC3-212ENST00000492407 MB21D2Q8IYB1 491 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-212ENST00000492407 SMARCC2Q8TAQ2 1214 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 WNT8BQ93098 351 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 TOP1MTQ969P6 601 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 GPRASP2Q96D09 838 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 SUGCTQ9HAC7 445 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 SEC63Q9UGP8 760 aaKnown RBP10.52□□□□□ -0.73
HDAC3-212ENST00000492407 KIAA1217Q5T5P2 1943 aa10.52□□□□□ -0.73
HDAC3-212ENST00000492407 MEIS2O14770 477 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 MCM5P33992 734 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 ANTXR2P58335 489 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 TFF2Q03403 129 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 SEMA3FQ13275 785 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 PTPROQ16827 1216 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 TCTN1Q2MV58 587 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 TAF2Q6P1X5 1199 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 CYFIP1Q7L576 1253 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 ZNF654Q8IZM8 581 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
HDAC3-212ENST00000492407 TNPO1Q92973 898 aaKnown RBP10.51□□□□□ -0.73
HDAC3-212ENST00000492407 LY9Q9HBG7 655 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 GBF1Q92538 1859 aa10.51□□□□□ -0.73
HDAC3-212ENST00000492407 SCN5AQ14524 2016 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 TREHO43280 583 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 NCK2O43639 380 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 KCNQ1P51787 676 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 LEXMQ3ZCV2 418 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.5□□□□□ -0.73
HDAC3-212ENST00000492407 RSPH3Q86UC2 560 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 SEPT1Q8WYJ6 367 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 MRPL38Q96DV4 380 aaKnown RBP10.5□□□□□ -0.73
HDAC3-212ENST00000492407 PSTPIP2Q9H939 334 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms