RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CTU1Q7Z7A3 348 aaKnown RBP21.02■□□□□ 0.96
MCF2L-230ENST00000491028 PDGFCQ9NRA1 345 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 DDX41Q9UJV9 622 aaKnown RBP21.02■□□□□ 0.96
MCF2L-230ENST00000491028 PTPN22Q9Y2R2 807 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 PTCH2Q9Y6C5 1203 aa21.02■□□□□ 0.96
MCF2L-230ENST00000491028 VWA3AA6NCI4 1184 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 NKRFO15226 690 aaKnown RBP eCLIP21.01■□□□□ 0.95
MCF2L-230ENST00000491028 DHX15O43143 795 aaKnown RBP21.01■□□□□ 0.95
MCF2L-230ENST00000491028 ARIH2O95376 493 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 TXNP10599 105 aaKnown RBP21.01■□□□□ 0.95
MCF2L-230ENST00000491028 GRK4P32298 578 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 LONP1P36776 959 aaKnown RBP21.01■□□□□ 0.95
MCF2L-230ENST00000491028 ADCYAP1R1P41586 468 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 PPP2R5CQ13362 524 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 PDIA5Q14554 519 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 PKD2L1Q9P0L9 805 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 VAV3Q9UKW4 847 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 PCDHA7Q9UN72 937 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 DOCK5Q9H7D0 1870 aa21.01■□□□□ 0.95
MCF2L-230ENST00000491028 TECP42680 631 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 KRT76Q01546 638 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 SP2Q02086 613 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 IL17AQ16552 155 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 CCDC144BQ3MJ40 725 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 DUSP28Q4G0W2 176 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 B3GNT9Q6UX72 402 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 IGSF22Q8N9C0 903 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 ZNF579Q8NAF0 562 aaKnown RBP21■□□□□ 0.95
MCF2L-230ENST00000491028 GJA10Q969M2 543 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 AK8Q96MA6 479 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 FAM184BQ9ULE4 1060 aa21■□□□□ 0.95
MCF2L-230ENST00000491028 GGPS1O95749 300 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 AKR1A1P14550 325 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 CACNB2Q08289 660 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-230ENST00000491028 SPIRE1Q08AE8 756 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 LY6KQ17RY6 165 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 PRAMEF19Q5SWL8 479 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 AXDND1Q5T1B0 1012 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-230ENST00000491028 MAP3K21Q5TCX8 1036 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 ADALQ6DHV7 355 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 ZNF746Q6NUN9 644 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-230ENST00000491028 METTL7BQ6UX53 244 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 JPH1Q9HDC5 661 aaPredicted RBP20.99■□□□□ 0.95
MCF2L-230ENST00000491028 STK24Q9Y6E0 443 aa20.99■□□□□ 0.95
MCF2L-230ENST00000491028 CAPN15O75808 1086 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 FARP2O94887 1054 aaPredicted RBP20.98■□□□□ 0.95
MCF2L-230ENST00000491028 GH1P01241 217 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 PRKAR2AP13861 404 aaKnown RBP20.98■□□□□ 0.95
MCF2L-230ENST00000491028 SFNP31947 248 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 TNFAIP2Q03169 654 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 GRIN1Q05586 938 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 PKN2Q16513 984 aaKnown RBP20.98■□□□□ 0.95
MCF2L-230ENST00000491028 CELF3Q5SZQ8 465 aaKnown RBP20.98■□□□□ 0.95
MCF2L-230ENST00000491028 RDM1Q8NG50 284 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 UIMC1Q96RL1 719 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 CSRNP2Q9H175 543 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 SLC9A2Q9UBY0 812 aa20.98■□□□□ 0.95
MCF2L-230ENST00000491028 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.97■□□□□ 0.95
MCF2L-230ENST00000491028 A0A1W2PQ27 194 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 A0A1W2PQ64 194 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 A0A1W2PQD8 194 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 GOLGA6L4A6NEF3 574 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 POTEMA6NI47 508 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 DDX39AO00148 427 aaKnown RBP20.97■□□□□ 0.95
MCF2L-230ENST00000491028 SEPT4O43236 478 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 INHAP05111 366 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 SMPD1P17405 629 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 JAK3P52333 1124 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 TRIM32Q13049 653 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 NCAPH2Q6IBW4 605 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 CYFIP1Q7L576 1253 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 DHX37Q8IY37 1157 aaKnown RBP20.97■□□□□ 0.95
MCF2L-230ENST00000491028 SMAP1Q8IYB5 467 aaPredicted RBP20.97■□□□□ 0.95
MCF2L-230ENST00000491028 TRPV1Q8NER1 839 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 EMID1Q96A84 441 aaPredicted RBP20.97■□□□□ 0.95
MCF2L-230ENST00000491028 CLIC6Q96NY7 704 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 UNC45AQ9H3U1 944 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 MLXIPQ9HAP2 919 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 LRWD1Q9UFC0 647 aa20.97■□□□□ 0.95
MCF2L-230ENST00000491028 DDX11L8A8MPP1 907 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 WDR64B1ANS9 1081 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 PRPF40AO75400 957 aaKnown RBP20.96■□□□□ 0.95
MCF2L-230ENST00000491028 MCM4P33991 863 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 LAMC2Q13753 1193 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 HAUS3Q68CZ6 603 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 FBXO46Q6PJ61 603 aaPredicted RBP20.96■□□□□ 0.95
MCF2L-230ENST00000491028 ERMNQ8TAM6 284 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 PRDM10Q9NQV6 1147 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 GNEQ9Y223 722 aaKnown RBP20.96■□□□□ 0.95
MCF2L-230ENST00000491028 Q9Y3F1 56 aa20.96■□□□□ 0.95
MCF2L-230ENST00000491028 SLC26A4O43511 780 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 CHMP2AO43633 222 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 TXLNAP40222 546 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 UBE2HP62256 183 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 ARHGAP1Q07960 439 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 RESP18Q5W5W9 173 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 SHC4Q6S5L8 630 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 MIER3Q7Z3K6 550 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 NEK9Q8TD19 979 aa20.95■□□□□ 0.94
MCF2L-230ENST00000491028 COPS5Q92905 334 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms