RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 VWCEQ96DN2 955 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 RNPC3Q96LT9 517 aaKnown RBP17.41■□□□□ 0.38
COL27A1-206ENST00000490831 HDAC6Q9UBN7 1215 aa17.41■□□□□ 0.38
COL27A1-206ENST00000490831 SORBS3O60504 671 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 ATP9AO75110 1047 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 LGALS2P05162 132 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 HOXC8P31273 242 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 CCL23P55773 120 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 CCT2P78371 535 aaKnown RBP17.4■□□□□ 0.38
COL27A1-206ENST00000490831 MTMR1Q13613 665 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 PTGISQ16647 500 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 MXRA8Q9BRK3 442 aa17.4■□□□□ 0.38
COL27A1-206ENST00000490831 H3BRB1 525 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 NOP56O00567 594 aaKnown RBP17.39■□□□□ 0.37
COL27A1-206ENST00000490831 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
COL27A1-206ENST00000490831 BFSP2Q13515 415 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 ZNF365Q70YC5 407 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 CAGE1Q8TC20 777 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 HERVK_113Q902F9 699 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 PGBD1Q96JS3 809 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 ALG1Q9BT22 464 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 SLC26A6Q9BXS9 759 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 TUT1Q9H6E5 874 aaKnown RBP17.39■□□□□ 0.37
COL27A1-206ENST00000490831 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 SH3GLB2Q9NR46 395 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 DOCK5Q9H7D0 1870 aa17.39■□□□□ 0.37
COL27A1-206ENST00000490831 MEIS1O00470 390 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 ADAMTS3O15072 1205 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 PFKMP08237 780 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 CYP3A4P08684 503 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 ACRP10323 421 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 GNA11P29992 359 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 RFC2P35250 354 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 CHMP4BP1P59074 171 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 CEP55Q53EZ4 464 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 NIPA1Q7RTP0 329 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 RPUSD2Q8IZ73 545 aaKnown RBP17.38■□□□□ 0.37
COL27A1-206ENST00000490831 FAM177A1Q8N128 213 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-206ENST00000490831 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 DHX38Q92620 1227 aaKnown RBP17.38■□□□□ 0.37
COL27A1-206ENST00000490831 SCLYQ96I15 445 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 KCNH7Q9NS40 1196 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 NOD1Q9Y239 953 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 TELO2Q9Y4R8 837 aa17.38■□□□□ 0.37
COL27A1-206ENST00000490831 IQCF3P0C7M6 154 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 ARHGAP4P98171 946 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 PTK7Q13308 1070 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 HIC1Q14526 733 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 TRIM22Q8IYM9 498 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 REXO1Q8N1G1 1221 aaKnown RBP17.37■□□□□ 0.37
COL27A1-206ENST00000490831 CCDC155Q8N6L0 562 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 CYP2W1Q8TAV3 490 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 BICD2Q8TD16 824 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 AFAP1L1Q8TED9 768 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 LARP6Q9BRS8 491 aaKnown RBP17.37■□□□□ 0.37
COL27A1-206ENST00000490831 NFASCO94856 1347 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 TANC1Q9C0D5 1861 aa17.37■□□□□ 0.37
COL27A1-206ENST00000490831 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-206ENST00000490831 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.36■□□□□ 0.37
COL27A1-206ENST00000490831 GSTTP1A0A1W2PQM5 241 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 CPLX1O14810 134 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 PPFIA3O75145 1194 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 DEXIO95424 95 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 SEC24BO95487 1268 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 FGBP02675 491 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 SSRP1Q08945 709 aaKnown RBP17.36■□□□□ 0.37
COL27A1-206ENST00000490831 ANKRD1Q15327 319 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 TRIM71Q2Q1W2 868 aaKnown RBP17.36■□□□□ 0.37
COL27A1-206ENST00000490831 JAKMIP3Q5VZ66 844 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 CPLX2Q6PUV4 134 aaKnown RBP17.36■□□□□ 0.37
COL27A1-206ENST00000490831 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 RETREG2Q8NC44 543 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 SEPT1Q8WYJ6 367 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 TPCN1Q9ULQ1 816 aa17.36■□□□□ 0.37
COL27A1-206ENST00000490831 PFKFB2O60825 505 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 SMIM10L2AP0DMW4 78 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 SMIM10L2BP0DMW5 78 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 ARP10275 920 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 TCF7P36402 384 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-206ENST00000490831 SCRN1Q12765 414 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 STK3Q13188 491 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 SERINC5Q86VE9 423 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 MTIF3Q9H2K0 278 aaKnown RBP17.35■□□□□ 0.37
COL27A1-206ENST00000490831 AGO4Q9HCK5 861 aaKnown RBP17.35■□□□□ 0.37
COL27A1-206ENST00000490831 JPH1Q9HDC5 661 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-206ENST00000490831 MTMR10Q9NXD2 777 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 VPS54Q9P1Q0 977 aa17.35■□□□□ 0.37
COL27A1-206ENST00000490831 ZNF215Q9UL58 517 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-206ENST00000490831 IGLV3-22A0A075B6J6 115 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 TMEM265A0A087WTH1 108 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 C17orf102A2RUQ5 167 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 FAM86B1E9PN63 330 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 LGR5O75473 907 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 PARNO95453 639 aaKnown RBP17.34■□□□□ 0.37
COL27A1-206ENST00000490831 FAM86B2P0C5J1 330 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 CKBP12277 381 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 SELPP16109 830 aa17.34■□□□□ 0.37
COL27A1-206ENST00000490831 CIITAP33076 1130 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms