RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CCL14Q16627 93 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 SLC9C1Q4G0N8 1177 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 LINC00301Q8NCQ3 95 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 LEO1Q8WVC0 666 aaPredicted RBP12.35□□□□□ -0.43
VARS2-210ENST00000490699 AK8Q96MA6 479 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
VARS2-210ENST00000490699 AGO4Q9HCK5 861 aaKnown RBP12.35□□□□□ -0.43
VARS2-210ENST00000490699 KCNMB3Q9NPA1 279 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 PKD2L1Q9P0L9 805 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 MORC2Q9Y6X9 1032 aaPredicted RBP12.35□□□□□ -0.43
VARS2-210ENST00000490699 DOCK3Q8IZD9 2030 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 ELP1O95163 1332 aa12.35□□□□□ -0.43
VARS2-210ENST00000490699 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 DDX11L8A8MPP1 907 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 MSH4O15457 936 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 CUTAO60888 179 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 GH1P01241 217 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 C7P10643 843 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 MARCKSP29966 332 aaPredicted RBP12.34□□□□□ -0.43
VARS2-210ENST00000490699 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
VARS2-210ENST00000490699 TNFAIP2Q03169 654 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 HAUS3Q68CZ6 603 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
VARS2-210ENST00000490699 CYP2W1Q8TAV3 490 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 TRIB2Q92519 343 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 SLC5A5Q92911 643 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 CCDC34Q96HJ3 373 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 CDK5RAP3Q96JB5 506 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
VARS2-210ENST00000490699 FTOQ9C0B1 505 aaKnown RBP eCLIP12.34□□□□□ -0.43
VARS2-210ENST00000490699 AP5M1Q9H0R1 490 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 JPH1Q9HDC5 661 aaPredicted RBP12.34□□□□□ -0.43
VARS2-210ENST00000490699 FAM13BQ9NYF5 915 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 PTPN22Q9Y2R2 807 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 MCM3APO60318 1980 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 NFASCO94856 1347 aa12.34□□□□□ -0.43
VARS2-210ENST00000490699 DDX39AO00148 427 aaKnown RBP12.33□□□□□ -0.44
VARS2-210ENST00000490699 MSCO60682 206 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
VARS2-210ENST00000490699 GGPS1O95749 300 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
VARS2-210ENST00000490699 ARP10275 920 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 ELNP15502 786 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 SFNP31947 248 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 UBA7P41226 1012 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 TECP42680 631 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 JAK3P52333 1124 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 LAMC2Q13753 1193 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 PDIA5Q14554 519 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 PTPAQ15257 358 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 CCDC144BQ3MJ40 725 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 KRT79Q5XKE5 535 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 ASTLQ6HA08 431 aaPredicted RBP12.33□□□□□ -0.44
VARS2-210ENST00000490699 NCAPH2Q6IBW4 605 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 CLEC17AQ6ZS10 378 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 SMAP1Q8IYB5 467 aaPredicted RBP12.33□□□□□ -0.44
VARS2-210ENST00000490699 RDM1Q8NG50 284 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 LENG9Q96B70 501 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 MTMR9Q96QG7 549 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 PYM1Q9BRP8 204 aaKnown RBP12.33□□□□□ -0.44
VARS2-210ENST00000490699 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
VARS2-210ENST00000490699 FLRT1Q9NZU1 646 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 LRWD1Q9UFC0 647 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 SRPRBQ9Y5M8 271 aaKnown RBP12.33□□□□□ -0.44
VARS2-210ENST00000490699 PTCH2Q9Y6C5 1203 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
VARS2-210ENST00000490699 RBM47A0AV96 593 aaKnown RBP12.32□□□□□ -0.44
VARS2-210ENST00000490699 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 SEPT4O43236 478 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 CHMP2AO43633 222 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 INHAP05111 366 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 RARBP10826 455 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 UBA1P22314 1058 aaKnown RBP12.32□□□□□ -0.44
VARS2-210ENST00000490699 ADCYAP1R1P41586 468 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 DUSP28Q4G0W2 176 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 ZNF746Q6NUN9 644 aaPredicted RBP12.32□□□□□ -0.44
VARS2-210ENST00000490699 MIS18BP1Q6P0N0 1132 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 FBXO46Q6PJ61 603 aaPredicted RBP12.32□□□□□ -0.44
VARS2-210ENST00000490699 METTL7BQ6UX53 244 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 CCDC73Q6ZRK6 1079 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 MIER3Q7Z3K6 550 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 OR6J1Q8NGC5 347 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 NEK9Q8TD19 979 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 CALML4Q96GE6 196 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 TMEM60Q9H2L4 133 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 GDPD2Q9HCC8 539 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 PRDM10Q9NQV6 1147 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 CCDC39Q9UFE4 941 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
VARS2-210ENST00000490699 KDM3AQ9Y4C1 1321 aa12.32□□□□□ -0.44
VARS2-210ENST00000490699 TCHHQ07283 1943 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 WNT7AO00755 349 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 SLC26A4O43511 780 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 ZEB2O60315 1214 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms