RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
DUBR-204ENST00000490441 CERS4Q9HA82 394 aa12.97□□□□□ -0.33
DUBR-204ENST00000490441 FRMPD4Q14CM0 1322 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 EMSYQ7Z589 1322 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 ABHD14A-ACY1A0A1B0GW23 586 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 H3BRB1 525 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 SH2B2O14492 632 aaPredicted RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 FIBPO43427 364 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 CXCL10P02778 98 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 CALM1P0DP23 149 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 CALM2P0DP24 149 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 CALM3P0DP25 149 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 ICAM3P32942 547 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 WDR5P61964 334 aaKnown RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 MRPS5P82675 430 aaKnown RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 ZNF200P98182 395 aaPredicted RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 XRRA1Q6P2D8 792 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 METTL7BQ6UX53 244 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 ARNTL2Q8WYA1 636 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.33
DUBR-204ENST00000490441 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 ESYT1Q9BSJ8 1104 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 TUT1Q9H6E5 874 aaKnown RBP12.96□□□□□ -0.33
DUBR-204ENST00000490441 ANO2Q9NQ90 1003 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 RTEL1Q9NZ71 1219 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.33
DUBR-204ENST00000490441 CHD7Q9P2D1 2997 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 SPATA31C2B4DYI2 1134 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 SLC27A2O14975 620 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 NBNO60934 754 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 PLEKHA8P1O95397 391 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 LGALS2P05162 132 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 THPOP40225 353 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 MRPS9P82933 396 aaKnown RBP12.95□□□□□ -0.34
DUBR-204ENST00000490441 TAP1Q03518 808 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 IKBKEQ14164 716 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 ZNF618Q5T7W0 954 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 USP17L6PQ6QN14 398 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 CYFIP1Q7L576 1253 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 NLRX1Q86UT6 975 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 ATP6V0A1Q93050 837 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 ASB2Q96Q27 587 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 C16orf70Q9BSU1 422 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
DUBR-204ENST00000490441 ZNF215Q9UL58 517 aaPredicted RBP12.95□□□□□ -0.34
DUBR-204ENST00000490441 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 PIK3CDO00329 1044 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 LGR5O75473 907 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 SMIM10L2AP0DMW4 78 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 SMIM10L2BP0DMW5 78 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 GNAT1P11488 350 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 RXRAP19793 462 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 LIFRP42702 1097 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 DEFB103AP81534 67 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 SP4Q02446 784 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 GPNMBQ14956 572 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
DUBR-204ENST00000490441 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 PCNX4Q63HM2 1172 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 CREB3L3Q68CJ9 461 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 SERINC5Q86VE9 423 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 GIMAP8Q8ND71 665 aaPredicted RBP12.94□□□□□ -0.34
DUBR-204ENST00000490441 PSTPIP2Q9H939 334 aa12.94□□□□□ -0.34
DUBR-204ENST00000490441 RYDENQ9NUL5 291 aaKnown RBP12.94□□□□□ -0.34
DUBR-204ENST00000490441 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 RFXAPO00287 272 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 MEIS2O14770 477 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 AAK1Q2M2I8 961 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 UTP14CQ5TAP6 766 aaKnown RBP12.93□□□□□ -0.34
DUBR-204ENST00000490441 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 SRBD1Q8N5C6 995 aaKnown RBP12.93□□□□□ -0.34
DUBR-204ENST00000490441 WNT8BQ93098 351 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 GPR20Q99678 358 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 SENP7Q9BQF6 1050 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 MTCH2Q9Y6C9 303 aa12.93□□□□□ -0.34
DUBR-204ENST00000490441 EPOPA6NHQ4 379 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 SPDYE3A6NKU9 549 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 TREHO43280 583 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 CAND2O75155 1236 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 ARHGEF15O94989 841 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 GJB5O95377 273 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 AMHP03971 560 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 POU3F3P20264 500 aaPredicted RBP12.92□□□□□ -0.34
DUBR-204ENST00000490441 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
DUBR-204ENST00000490441 HIC1Q14526 733 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 MBTPS1Q14703 1052 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 NECTIN1Q15223 517 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 FAM117BQ6P1L5 589 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 HEATR3Q7Z4Q2 680 aa12.92□□□□□ -0.34
DUBR-204ENST00000490441 TMCO2Q7Z6W1 182 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms