RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 HAUS3Q68CZ6 603 aa23.46■■□□□ 1.35
SND1-214ENST00000489417 SH3RF1Q7Z6J0 888 aa23.46■■□□□ 1.35
SND1-214ENST00000489417 PAGE5Q96GU1 130 aa23.46■■□□□ 1.35
SND1-214ENST00000489417 CDHR1Q96JP9 859 aa23.46■■□□□ 1.35
SND1-214ENST00000489417 FUCA2Q9BTY2 467 aa23.46■■□□□ 1.35
SND1-214ENST00000489417 CUEDC2Q9H467 287 aa23.46■■□□□ 1.35
SND1-214ENST00000489417 KIAA1468Q9P260 1216 aa23.46■■□□□ 1.35
SND1-214ENST00000489417 FOXN1O15353 648 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 AOC2O75106 756 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 MDM2Q00987 491 aaPredicted RBP23.45■■□□□ 1.34
SND1-214ENST00000489417 SEMA3FQ13275 785 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 CRHR2Q13324 411 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 PNOCQ13519 176 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 HYIQ5T013 277 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 SASS6Q6UVJ0 657 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 GRAMD1CQ8IYS0 662 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 ERCC4Q92889 916 aaPredicted RBP23.45■■□□□ 1.34
SND1-214ENST00000489417 UNC45AQ9H3U1 944 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 TSPY26PQ9H489 355 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 MAGEF1Q9HAY2 307 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 TBC1D22BQ9NU19 505 aa23.45■■□□□ 1.34
SND1-214ENST00000489417 LRRC37A2A6NM11 1700 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 EML1O00423 815 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 DHX15O43143 795 aaKnown RBP23.44■■□□□ 1.34
SND1-214ENST00000489417 CA12O43570 354 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 ALDH1A1P00352 501 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 CCDC192P0DO97 292 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 GRB14Q14449 540 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 ZNF792Q3KQV3 632 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 B3GNT9Q6UX72 402 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 REM2Q8IYK8 340 aaPredicted RBP23.44■■□□□ 1.34
SND1-214ENST00000489417 NT5C3AQ9H0P0 336 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 STK17AQ9UEE5 414 aa23.44■■□□□ 1.34
SND1-214ENST00000489417 SLC15A5A6NIM6 579 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 SPATA31C2B4DYI2 1134 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 DDX39AO00148 427 aaKnown RBP23.43■■□□□ 1.34
SND1-214ENST00000489417 CHMP2AO43633 222 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 ATP9AO75110 1047 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 COBLO75128 1261 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 PRR29P0C7W0 189 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 ICAM3P32942 547 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 AFMP43652 599 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 TYRO3Q06418 890 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 GAS2L3Q86XJ1 694 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 MORC4Q8TE76 937 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 LRRC15Q8TF66 581 aa23.43■■□□□ 1.34
SND1-214ENST00000489417 ASB14A6NK59 587 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 MED24O75448 989 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 EIF2AK1Q9BQI3 630 aaKnown RBP23.42■■□□□ 1.34
SND1-214ENST00000489417 POLR3CQ9BUI4 534 aaPredicted RBP23.42■■□□□ 1.34
SND1-214ENST00000489417 TUBE1Q9UJT0 475 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 ZNF236Q9UL36 1845 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 POTEB3A0JP26 581 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 KCNA2P16389 499 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 RPA1P27694 616 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 EPHA7Q15375 998 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 ECM1Q16610 540 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 POTEBQ6S5H4 581 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 TCEAL9Q9UHQ7 104 aa23.42■■□□□ 1.34
SND1-214ENST00000489417 NFASCO94856 1347 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 ZNFX1Q9P2E3 1918 aaKnown RBP23.41■■□□□ 1.34
SND1-214ENST00000489417 GTPBP6O43824 516 aaPredicted RBP23.41■■□□□ 1.34
SND1-214ENST00000489417 SEPT14Q6ZU15 432 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 MIER3Q7Z3K6 550 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 ZNF467Q7Z7K2 595 aaPredicted RBP23.41■■□□□ 1.34
SND1-214ENST00000489417 DPP9Q86TI2 863 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 CATSPER3Q86XQ3 398 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 STAMQ92783 540 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 MTRQ99707 1265 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 BLOC1S4Q9NUP1 217 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 KBTBD4Q9NVX7 518 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 PCDHA5Q9Y5H7 936 aa23.41■■□□□ 1.34
SND1-214ENST00000489417 SMC2O95347 1197 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 SPATA31C1P0DKV0 1188 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 KRT76Q01546 638 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 NEK9Q8TD19 979 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 RAD54LQ92698 747 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 SMARCE1Q969G3 411 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 TUFT1Q9NNX1 390 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 KIAA1024Q9UPX6 916 aa23.4■■□□□ 1.34
SND1-214ENST00000489417 DIS3Q9Y2L1 958 aaKnown RBP23.4■■□□□ 1.34
SND1-214ENST00000489417 CYP4A11Q02928 519 aa23.39■■□□□ 1.33
SND1-214ENST00000489417 DPYDQ12882 1025 aa23.39■■□□□ 1.33
SND1-214ENST00000489417 STX1AQ16623 288 aa23.39■■□□□ 1.33
SND1-214ENST00000489417 MORN1Q5T089 497 aa23.39■■□□□ 1.33
SND1-214ENST00000489417 KCNK18Q7Z418 384 aa23.39■■□□□ 1.33
SND1-214ENST00000489417 LARP4BQ92615 738 aaKnown RBP23.39■■□□□ 1.33
SND1-214ENST00000489417 DYDC2Q96IM9 177 aa23.39■■□□□ 1.33
SND1-214ENST00000489417 HSD17B14Q9BPX1 270 aa23.39■■□□□ 1.33
SND1-214ENST00000489417 PLXNA1Q9UIW2 1896 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 POTEFA5A3E0 1075 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 GOLGA6L3A6NEY3 463 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 MCM6Q14566 821 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 ZNF746Q6NUN9 644 aaPredicted RBP23.38■■□□□ 1.33
SND1-214ENST00000489417 POTEGQ6S5H5 508 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 SV2BQ7L1I2 683 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 ARMCX2Q7L311 632 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 EEPD1Q7L9B9 569 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 SLC5A4Q9NY91 659 aa23.38■■□□□ 1.33
SND1-214ENST00000489417 RGL1Q9NZL6 768 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms