RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 AOC1P19801 751 aa17.84■□□□□ 0.45
UFD1-209ENST00000489406 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
UFD1-209ENST00000489406 MICAL1Q8TDZ2 1067 aa17.84■□□□□ 0.45
UFD1-209ENST00000489406 S1PR5Q9H228 398 aa17.84■□□□□ 0.45
UFD1-209ENST00000489406 NR2E1Q9Y466 385 aa17.84■□□□□ 0.45
UFD1-209ENST00000489406 ASGR2P07307 311 aa17.83■□□□□ 0.44
UFD1-209ENST00000489406 ATXN1P54253 815 aaKnown RBP17.83■□□□□ 0.44
UFD1-209ENST00000489406 SBK1Q52WX2 424 aa17.83■□□□□ 0.44
UFD1-209ENST00000489406 KIAA0319Q5VV43 1072 aa17.83■□□□□ 0.44
UFD1-209ENST00000489406 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
UFD1-209ENST00000489406 RASGRP2Q7LDG7 609 aa17.83■□□□□ 0.44
UFD1-209ENST00000489406 FAM9BQ8IZU0 186 aa17.83■□□□□ 0.44
UFD1-209ENST00000489406 APBB2Q92870 758 aa17.83■□□□□ 0.44
UFD1-209ENST00000489406 ZNF689Q96CS4 500 aaPredicted RBP17.83■□□□□ 0.44
UFD1-209ENST00000489406 MRPL42Q9Y6G3 142 aaKnown RBP17.83■□□□□ 0.44
UFD1-209ENST00000489406 FAM208BQ5VWN6 2430 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 C2CD4DB7Z1M9 353 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 PPFIA3O75145 1194 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 HOXB3P14651 431 aaPredicted RBP17.82■□□□□ 0.44
UFD1-209ENST00000489406 RPS6P62753 249 aaKnown RBP17.82■□□□□ 0.44
UFD1-209ENST00000489406 NAALADL2Q58DX5 795 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 DNERQ8NFT8 737 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 CLEC4DQ8WXI8 215 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 CDH22Q9UJ99 828 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 TNNQ9UQP3 1299 aa17.82■□□□□ 0.44
UFD1-209ENST00000489406 B4DLN1 442 aa17.81■□□□□ 0.44
UFD1-209ENST00000489406 MRPL12P52815 198 aaKnown RBP17.81■□□□□ 0.44
UFD1-209ENST00000489406 ATP6V0A1Q93050 837 aa17.81■□□□□ 0.44
UFD1-209ENST00000489406 RANBP17Q9H2T7 1088 aaKnown RBP17.81■□□□□ 0.44
UFD1-209ENST00000489406 MTMR7Q9Y216 660 aa17.81■□□□□ 0.44
UFD1-209ENST00000489406 FASNP49327 2511 aaKnown RBP17.81■□□□□ 0.44
UFD1-209ENST00000489406 NPR3P17342 541 aa17.8■□□□□ 0.44
UFD1-209ENST00000489406 TECP42680 631 aa17.8■□□□□ 0.44
UFD1-209ENST00000489406 ANKRD54Q6NXT1 300 aa17.8■□□□□ 0.44
UFD1-209ENST00000489406 PUS7LQ9H0K6 701 aaKnown RBP17.8■□□□□ 0.44
UFD1-209ENST00000489406 C1orf115Q9H7X2 142 aa17.8■□□□□ 0.44
UFD1-209ENST00000489406 C17orf102A2RUQ5 167 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 TREHO43280 583 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 DGKIO75912 1065 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 TSPY3P0CV98 308 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 TSPY8P0CW00 308 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 SLC16A2P36021 539 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 DUSP6Q16828 381 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 SYCE2Q6PIF2 218 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 NEDD1Q8NHV4 660 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 RTP3Q9BQQ7 232 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.79■□□□□ 0.442e-8■■■□□ 18.1
UFD1-209ENST00000489406 IL1RAPL2Q9NP60 686 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
UFD1-209ENST00000489406 DCDC2BA2VCK2 349 aa17.78■□□□□ 0.44
UFD1-209ENST00000489406 ENPP3O14638 875 aa17.78■□□□□ 0.44
UFD1-209ENST00000489406 RIN2Q8WYP3 895 aaPredicted RBP17.78■□□□□ 0.44
UFD1-209ENST00000489406 ZNF287Q9HBT7 754 aa17.78■□□□□ 0.44
UFD1-209ENST00000489406 SH2B1Q9NRF2 756 aaPredicted RBP17.78■□□□□ 0.44
UFD1-209ENST00000489406 LIMD1Q9UGP4 676 aa17.78■□□□□ 0.44
UFD1-209ENST00000489406 DDX41Q9UJV9 622 aaKnown RBP17.78■□□□□ 0.44
UFD1-209ENST00000489406 GSG1L2A8MUP6 293 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 ADRB1P08588 477 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 SRGAP2BP0DMP2 458 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 SDHBP21912 280 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 LAMC2Q13753 1193 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 UBE3CQ15386 1083 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 PAN2Q504Q3 1202 aaKnown RBP17.77■□□□□ 0.44
UFD1-209ENST00000489406 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 LLGL2Q6P1M3 1020 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 PPTC7Q8NI37 304 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 EMID1Q96A84 441 aaPredicted RBP17.77■□□□□ 0.44
UFD1-209ENST00000489406 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 CDCA3Q99618 268 aaPredicted RBP17.77■□□□□ 0.44
UFD1-209ENST00000489406 POMKQ9H5K3 350 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 EXOC6BQ9Y2D4 811 aa17.77■□□□□ 0.44
UFD1-209ENST00000489406 KIAA1671Q9BY89 1806 aa17.77■□□□□ 0.43
UFD1-209ENST00000489406 FSD2A1L4K1 749 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 SORBS3O60504 671 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 CAND2O75155 1236 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 TFAP4Q01664 338 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 CCDC96Q2M329 555 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 TMEM184AQ6ZMB5 413 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 CMTR2Q8IYT2 770 aaKnown RBP17.76■□□□□ 0.43
UFD1-209ENST00000489406 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 STX8Q9UNK0 236 aa17.76■□□□□ 0.43
UFD1-209ENST00000489406 PPFIA4O75335 1185 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 GHRP10912 638 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 TRIM27P14373 513 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 ERVFC1P60507 584 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 KCNC3Q14003 757 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 SYDE2Q5VT97 1194 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 STRBPQ96SI9 672 aaKnown RBP17.75■□□□□ 0.43
UFD1-209ENST00000489406 BOLA2Q9H3K6 86 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 RNPEPQ9H4A4 650 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 GPR179Q6PRD1 2367 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 PLIN4Q96Q06 1357 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 PLXNA4Q9HCM2 1894 aa17.75■□□□□ 0.43
UFD1-209ENST00000489406 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
UFD1-209ENST00000489406 SMIM10L2AP0DMW4 78 aa17.74■□□□□ 0.43
UFD1-209ENST00000489406 SMIM10L2BP0DMW5 78 aa17.74■□□□□ 0.43
UFD1-209ENST00000489406 RARSP54136 660 aaKnown RBP17.74■□□□□ 0.43
UFD1-209ENST00000489406 COL9A3Q14050 684 aaPredicted RBP17.74■□□□□ 0.43
UFD1-209ENST00000489406 ZC3H14Q6PJT7 736 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms