RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SMOC2Q9H3U7 446 aa13.66□□□□□ -0.22
HDAC6-233ENST00000489352 NCDNQ9UBB6 729 aa13.66□□□□□ -0.22
HDAC6-233ENST00000489352 FBXL21Q9UKT6 434 aa13.66□□□□□ -0.22
HDAC6-233ENST00000489352 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
HDAC6-233ENST00000489352 C17orf102A2RUQ5 167 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 DCDC2BA2VCK2 349 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 PRR5-ARHGAP8B1AHC4 643 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 ADRB1P08588 477 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 ARHGAP8P85298 464 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
HDAC6-233ENST00000489352 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 CWF19L1Q69YN2 538 aaKnown RBP13.65□□□□□ -0.22
HDAC6-233ENST00000489352 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 AACSQ86V21 672 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
HDAC6-233ENST00000489352 GMCL1Q96IK5 515 aa13.65□□□□□ -0.22
HDAC6-233ENST00000489352 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 C2CD4DB7Z1M9 353 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 NFIBO00712 420 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 PLA2G6O60733 806 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 CAND2O75155 1236 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 ASGR2P07307 311 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 ANKRD54Q6NXT1 300 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 SLC30A10Q6XR72 485 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 ATP8B4Q8TF62 1192 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-233ENST00000489352 NECTIN4Q96NY8 510 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 RTKNQ9BST9 563 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 S1PR5Q9H228 398 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 LIMD1Q9UGP4 676 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 MYH7P12883 1935 aa13.64□□□□□ -0.23
HDAC6-233ENST00000489352 IGKV6D-41A0A0C4DH26 115 aa13.63□□□□□ -0.23
HDAC6-233ENST00000489352 BCAR3O75815 825 aa13.63□□□□□ -0.23
HDAC6-233ENST00000489352 F2P00734 622 aa13.63□□□□□ -0.23
HDAC6-233ENST00000489352 HOXB8P17481 243 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-233ENST00000489352 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
HDAC6-233ENST00000489352 SPOUT1Q5T280 376 aaKnown RBP13.63□□□□□ -0.23
HDAC6-233ENST00000489352 CCDC62Q6P9F0 684 aa13.63□□□□□ -0.23
HDAC6-233ENST00000489352 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
HDAC6-233ENST00000489352 ZNF689Q96CS4 500 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-233ENST00000489352 MRPL42Q9Y6G3 142 aaKnown RBP13.63□□□□□ -0.23
HDAC6-233ENST00000489352 TTC3P53804 2025 aa13.63□□□□□ -0.23
HDAC6-233ENST00000489352 HAS3O00219 553 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
HDAC6-233ENST00000489352 DGKIO75912 1065 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 EDNRBP24530 442 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 LMNB2Q03252 620 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 LAMC2Q13753 1193 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 POLA2Q14181 598 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 DUSP6Q16828 381 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 SIX5Q8N196 739 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 TDRD5Q8NAT2 981 aaKnown RBP13.62□□□□□ -0.23
HDAC6-233ENST00000489352 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-233ENST00000489352 MTMR7Q9Y216 660 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
HDAC6-233ENST00000489352 PRDM1O75626 825 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 ADD2P35612 726 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 RARSP54136 660 aaKnown RBP13.61□□□□□ -0.23
HDAC6-233ENST00000489352 RPS6P62753 249 aaKnown RBP13.61□□□□□ -0.23
HDAC6-233ENST00000489352 UBE3AQ05086 875 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 CCDC96Q2M329 555 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 PAN2Q504Q3 1202 aaKnown RBP13.61□□□□□ -0.23
HDAC6-233ENST00000489352 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 PPP4R3BQ5MIZ7 849 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 VARS2Q5ST30 1063 aaKnown RBP13.61□□□□□ -0.23
HDAC6-233ENST00000489352 PDE12Q6L8Q7 609 aaKnown RBP13.61□□□□□ -0.23
HDAC6-233ENST00000489352 RUFY4Q6ZNE9 571 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 CMTR2Q8IYT2 770 aaKnown RBP13.61□□□□□ -0.23
HDAC6-233ENST00000489352 VN1R2Q8NFZ6 395 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 SSH3Q8TE77 659 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
HDAC6-233ENST00000489352 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 GPR179Q6PRD1 2367 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
HDAC6-233ENST00000489352 ENPP3O14638 875 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 TREHO43280 583 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 PPFIA4O75335 1185 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 GNAT1P11488 350 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-233ENST00000489352 NPR3P17342 541 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 ATP8B2P98198 1209 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 STXBP2Q15833 593 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 SLFNL1Q499Z3 407 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 TMEM184AQ6ZMB5 413 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 OSBPL7Q9BZF2 842 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 POMKQ9H5K3 350 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 AAASQ9NRG9 546 aa13.6□□□□□ -0.23
HDAC6-233ENST00000489352 ASPMQ8IZT6 3477 aa13.59□□□□□ -0.23
HDAC6-233ENST00000489352 MTHFRP42898 656 aa13.59□□□□□ -0.23
HDAC6-233ENST00000489352 ITIH3Q06033 890 aa13.59□□□□□ -0.23
HDAC6-233ENST00000489352 HIC1Q14526 733 aa13.59□□□□□ -0.23
HDAC6-233ENST00000489352 PPM1JQ5JR12 505 aa13.59□□□□□ -0.23
HDAC6-233ENST00000489352 SYCE2Q6PIF2 218 aa13.59□□□□□ -0.23
HDAC6-233ENST00000489352 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms