RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.65□□□□□ -1.5
CBWD1-216ENST00000489272 NGRNQ9NPE2 291 aaKnown RBP5.65□□□□□ -1.5
CBWD1-216ENST00000489272 ZFR2Q9UPR6 939 aaKnown RBP5.65□□□□□ -1.5
CBWD1-216ENST00000489272 X6R8D5 127 aa5.65□□□□□ -1.5
CBWD1-216ENST00000489272 AGRPO00253 132 aa5.64□□□□□ -1.51
CBWD1-216ENST00000489272 BCL6P41182 706 aa5.64□□□□□ -1.51
CBWD1-216ENST00000489272 MRM1Q6IN84 353 aaKnown RBP5.64□□□□□ -1.51
CBWD1-216ENST00000489272 EEPD1Q7L9B9 569 aa5.64□□□□□ -1.51
CBWD1-216ENST00000489272 TMEFF2Q9UIK5 374 aaPredicted RBP5.64□□□□□ -1.51
CBWD1-216ENST00000489272 LAMTOR5O43504 91 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 TCF3P15923 654 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 LTBRP36941 435 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 ETFBP38117 255 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 INHBCP55103 352 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 GFRA1P56159 465 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 ITGA1P56199 1179 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 NKX3-2P78367 333 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 FOXE3Q13461 319 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 TESK1Q15569 626 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 SF1Q15637 639 aaKnown RBP5.63□□□□□ -1.51
CBWD1-216ENST00000489272 PRSS53Q2L4Q9 553 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 MIIPQ5JXC2 388 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 FAM26FQ5R3K3 315 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 FAM124AQ86V42 546 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 KREMEN2Q8NCW0 462 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 MICAL1Q8TDZ2 1067 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 CHAMP1Q96JM3 812 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 EPN3Q9H201 632 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 FBXL7Q9UJT9 491 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 ZNF652Q9Y2D9 606 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 TCAF1Q9Y4C2 921 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 PCDHA2Q9Y5H9 948 aa5.63□□□□□ -1.51
CBWD1-216ENST00000489272 MROH6A6NGR9 719 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 H7BY64 318 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 FGRP09769 529 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 ITGB6P18564 788 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 STAT5AP42229 794 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 LSAMPQ13449 338 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 SURF1Q15526 300 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 TMEM145Q8NBT3 493 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 RCBTB1Q8NDN9 531 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 WWC2-AS2Q96NR7 200 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 SYT3Q9BQG1 590 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 ZNF408Q9H9D4 720 aa5.62□□□□□ -1.51
CBWD1-216ENST00000489272 R3HCC1Q9Y3T6 440 aaKnown RBP5.62□□□□□ -1.51
CBWD1-216ENST00000489272 ARNTLO00327 626 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 HGSO14964 777 aaPredicted RBP5.61□□□□□ -1.51
CBWD1-216ENST00000489272 GPR42O15529 346 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 ZNF202O95125 648 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 GJB6O95452 261 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 ARID5AQ03989 594 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 STEAP3Q658P3 488 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 STK32CQ86UX6 486 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 C1orf159Q96HA4 380 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 CLDND1Q9NY35 253 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 PCDHB4Q9Y5E5 795 aa5.61□□□□□ -1.51
CBWD1-216ENST00000489272 DGKIO75912 1065 aa5.6□□□□□ -1.51
CBWD1-216ENST00000489272 LCP1P13796 627 aa5.6□□□□□ -1.51
CBWD1-216ENST00000489272 CR1LQ2VPA4 569 aa5.6□□□□□ -1.51
CBWD1-216ENST00000489272 SLC10A6Q3KNW5 377 aa5.6□□□□□ -1.51
CBWD1-216ENST00000489272 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
CBWD1-216ENST00000489272 CIR1Q86X95 450 aaPredicted RBP5.6□□□□□ -1.51
CBWD1-216ENST00000489272 KCTD13Q8WZ19 329 aa5.6□□□□□ -1.51
CBWD1-216ENST00000489272 TOE1Q96GM8 510 aaKnown RBP5.6□□□□□ -1.51
CBWD1-216ENST00000489272 EPB41L1Q9H4G0 881 aa5.6□□□□□ -1.51
CBWD1-216ENST00000489272 NPEPPSL1A6NEC2 478 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 DDX3XO00571 662 aaKnown RBP eCLIP5.59□□□□□ -1.51
CBWD1-216ENST00000489272 MAFKO60675 156 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 PPP2R2AP63151 447 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 MAP4K2Q12851 820 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 EMC4Q5J8M3 183 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 PRR31Q5SQ13 230 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 SLC35F1Q5T1Q4 408 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 PRAMEF18Q5VWM3 479 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 DENND5AQ6IQ26 1287 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 ARRDC4Q8NCT1 418 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 TINF2Q9BSI4 451 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 DTLQ9NZJ0 730 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 NPFFR2Q9Y5X5 522 aa5.59□□□□□ -1.51
CBWD1-216ENST00000489272 TCRBV5S2A0A599 114 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 CYP7B1O75881 506 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 DNAJA1P31689 397 aaKnown RBP5.58□□□□□ -1.52
CBWD1-216ENST00000489272 MCM7P33993 719 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 GRIA2P42262 883 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 ADAM9Q13443 819 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 MCF2L2Q86YR7 1114 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 TXNDC5Q8NBS9 432 aaKnown RBP5.58□□□□□ -1.52
CBWD1-216ENST00000489272 PHOSPHO1Q8TCT1 267 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.58□□□□□ -1.52
CBWD1-216ENST00000489272 HNRNPLLQ8WVV9 542 aaKnown RBP5.58□□□□□ -1.52
CBWD1-216ENST00000489272 ZNF503Q96F45 646 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 LCORQ96JN0 433 aaPredicted RBP5.58□□□□□ -1.52
CBWD1-216ENST00000489272 CLIC6Q96NY7 704 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 WRNIP1Q96S55 665 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 MYOTQ9UBF9 498 aa5.58□□□□□ -1.52
CBWD1-216ENST00000489272 CCDC9Q9Y3X0 531 aaKnown RBP5.58□□□□□ -1.52
CBWD1-216ENST00000489272 KRIT1O00522 736 aa5.57□□□□□ -1.52
CBWD1-216ENST00000489272 NARSO43776 548 aaKnown RBP5.57□□□□□ -1.52
CBWD1-216ENST00000489272 TADA3O75528 432 aa5.57□□□□□ -1.52
CBWD1-216ENST00000489272 CAPNS1P04632 268 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms