RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 MTIF3Q9H2K0 278 aaKnown RBP27.42■■□□□ 1.98
PTPN18-213ENST00000489215 NCOA5Q9HCD5 579 aaKnown RBP27.42■■□□□ 1.98
PTPN18-213ENST00000489215 IL23AQ9NPF7 189 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 GTF2IRD1Q9UHL9 959 aa27.42■■□□□ 1.98
PTPN18-213ENST00000489215 H3BRB1 525 aa27.41■■□□□ 1.98
PTPN18-213ENST00000489215 SOX1O00570 391 aaPredicted RBP27.41■■□□□ 1.98
PTPN18-213ENST00000489215 DEXIO95424 95 aa27.41■■□□□ 1.98
PTPN18-213ENST00000489215 PFKMP08237 780 aa27.41■■□□□ 1.98
PTPN18-213ENST00000489215 ZNF286BP0CG31 522 aa27.41■■□□□ 1.98
PTPN18-213ENST00000489215 REXO1Q8N1G1 1221 aaKnown RBP27.41■■□□□ 1.98
PTPN18-213ENST00000489215 CAGE1Q8TC20 777 aa27.41■■□□□ 1.98
PTPN18-213ENST00000489215 GPR20Q99678 358 aa27.41■■□□□ 1.98
PTPN18-213ENST00000489215 C16orf70Q9BSU1 422 aa27.41■■□□□ 1.98
PTPN18-213ENST00000489215 SLKQ9H2G2 1235 aaPredicted RBP27.41■■□□□ 1.98
PTPN18-213ENST00000489215 TUT1Q9H6E5 874 aaKnown RBP27.41■■□□□ 1.98
PTPN18-213ENST00000489215 ZNF215Q9UL58 517 aaPredicted RBP27.41■■□□□ 1.98
PTPN18-213ENST00000489215 SORBS3O60504 671 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 CYP2C9P11712 490 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 RFC2P35250 354 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 ZNF76P36508 570 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 CEP55Q53EZ4 464 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 NIPA1Q7RTP0 329 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 LRCH3Q96II8 777 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 HDAC6Q9UBN7 1215 aa27.4■■□□□ 1.98
PTPN18-213ENST00000489215 PARNO95453 639 aaKnown RBP27.39■■□□□ 1.98
PTPN18-213ENST00000489215 LGALS2P05162 132 aa27.39■■□□□ 1.98
PTPN18-213ENST00000489215 KCNA2P16389 499 aa27.39■■□□□ 1.98
PTPN18-213ENST00000489215 EPHB4P54760 987 aa27.39■■□□□ 1.98
PTPN18-213ENST00000489215 FGBP02675 491 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 CCL23P55773 120 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 SMAD3P84022 425 aaKnown RBP27.38■■□□□ 1.97
PTPN18-213ENST00000489215 STK3Q13188 491 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 TMEM240Q5SV17 173 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 JAKMIP3Q5VZ66 844 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 GDF6Q6KF10 455 aaPredicted RBP27.38■■□□□ 1.97
PTPN18-213ENST00000489215 SEPT1Q8WYJ6 367 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.38■■□□□ 1.972e-6■□□□□ 8.4
PTPN18-213ENST00000489215 SDF4Q9BRK5 362 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 C22orf23Q9BZE7 217 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 KCNH7Q9NS40 1196 aa27.38■■□□□ 1.97
PTPN18-213ENST00000489215 ATP9AO75110 1047 aa27.37■■□□□ 1.97
PTPN18-213ENST00000489215 CYP3A4P08684 503 aa27.37■■□□□ 1.97
PTPN18-213ENST00000489215 GNAT1P11488 350 aa27.37■■□□□ 1.97
PTPN18-213ENST00000489215 ARHGAP4P98171 946 aa27.37■■□□□ 1.97
PTPN18-213ENST00000489215 FAM109BQ6ICB4 259 aaPredicted RBP27.37■■□□□ 1.97
PTPN18-213ENST00000489215 AFAP1L1Q8TED9 768 aa27.37■■□□□ 1.97
PTPN18-213ENST00000489215 TMEM260Q9NX78 707 aa27.37■■□□□ 1.97
PTPN18-213ENST00000489215 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.36■■□□□ 1.97
PTPN18-213ENST00000489215 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.36■■□□□ 1.97
PTPN18-213ENST00000489215 MEIS1O00470 390 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 NLRP5P59047 1200 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 PTK7Q13308 1070 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 GALNT17Q6IS24 598 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 ZNF365Q70YC5 407 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 TNPO1Q92973 898 aaKnown RBP27.36■■□□□ 1.97
PTPN18-213ENST00000489215 PGBD1Q96JS3 809 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 LARP6Q9BRS8 491 aaKnown RBP27.36■■□□□ 1.97
PTPN18-213ENST00000489215 WNT8AQ9H1J5 351 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 BCAS3Q9H6U6 928 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 NFASCO94856 1347 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 UMODL1Q5DID0 1318 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 DOCK5Q9H7D0 1870 aa27.36■■□□□ 1.97
PTPN18-213ENST00000489215 PFKFB2O60825 505 aa27.35■■□□□ 1.97
PTPN18-213ENST00000489215 XBP1P17861 261 aa27.35■■□□□ 1.97
PTPN18-213ENST00000489215 C16orf59Q7L2K0 433 aa27.35■■□□□ 1.97
PTPN18-213ENST00000489215 JPH1Q9HDC5 661 aaPredicted RBP27.35■■□□□ 1.97
PTPN18-213ENST00000489215 C17orf102A2RUQ5 167 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 IQCF3P0C7M6 154 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 TCF7P36402 384 aaPredicted RBP27.34■■□□□ 1.97
PTPN18-213ENST00000489215 AK2P54819 239 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 RBL2Q08999 1139 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 HERVK_113Q902F9 699 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 VPS54Q9P1Q0 977 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 SLC9A2Q9UBY0 812 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 TPCN1Q9ULQ1 816 aa27.34■■□□□ 1.97
PTPN18-213ENST00000489215 ACRP10323 421 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 ACTN1P12814 892 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 NEK4P51957 841 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 SETQ01105 290 aaPredicted RBP27.33■■□□□ 1.97
PTPN18-213ENST00000489215 SP4Q02446 784 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 SCRN1Q12765 414 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 PPP1R13LQ8WUF5 828 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 SCLYQ96I15 445 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 SMARCAD1Q9H4L7 1026 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 ERAP1Q9NZ08 941 aa27.33■■□□□ 1.97
PTPN18-213ENST00000489215 UTP14CQ5TAP6 766 aaKnown RBP27.32■■□□□ 1.96
PTPN18-213ENST00000489215 RASIP1Q5U651 963 aa27.32■■□□□ 1.96
PTPN18-213ENST00000489215 CYP2W1Q8TAV3 490 aa27.32■■□□□ 1.96
PTPN18-213ENST00000489215 CRYGNQ8WXF5 182 aa27.32■■□□□ 1.96
PTPN18-213ENST00000489215 WASF1Q92558 559 aa27.32■■□□□ 1.96
PTPN18-213ENST00000489215 AGO4Q9HCK5 861 aaKnown RBP27.32■■□□□ 1.96
PTPN18-213ENST00000489215 PCDHA4Q9UN74 947 aa27.32■■□□□ 1.96
PTPN18-213ENST00000489215 STK36Q9NRP7 1315 aa27.32■■□□□ 1.96
PTPN18-213ENST00000489215 PPFIA3O75145 1194 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 SEC24BO95487 1268 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 SMIM10L2AP0DMW4 78 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 SMIM10L2BP0DMW5 78 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 SELPP16109 830 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 USP11P51784 963 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 PLA2G4DQ86XP0 818 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms