RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 C4orf32Q8N8J7 132 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 LEO1Q8WVC0 666 aaPredicted RBP13.91□□□□□ -0.18
TRAIP-209ENST00000488860 HAS1Q92839 578 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 SLC5A5Q92911 643 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 FAM20AQ96MK3 541 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 GBP4Q96PP9 640 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 MTMR9Q96QG7 549 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 SCAND2PQ9GZW5 306 aaPredicted RBP13.91□□□□□ -0.18
TRAIP-209ENST00000488860 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
TRAIP-209ENST00000488860 FAM184BQ9ULE4 1060 aa13.91□□□□□ -0.18
TRAIP-209ENST00000488860 CENPFP49454 3210 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 RBM47A0AV96 593 aaKnown RBP13.9□□□□□ -0.18
TRAIP-209ENST00000488860 MAFGO15525 162 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 ADCY6O43306 1168 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 SMPD1P17405 629 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 TECP42680 631 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 ME1P48163 572 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 SP2Q02086 613 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 NEDD9Q14511 834 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 FBXO46Q6PJ61 603 aaPredicted RBP13.9□□□□□ -0.18
TRAIP-209ENST00000488860 DTHD1Q6ZMT9 781 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 DHX37Q8IY37 1157 aaKnown RBP13.9□□□□□ -0.18
TRAIP-209ENST00000488860 OR6J1Q8NGC5 347 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 MLXIPQ9HAP2 919 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 JPH1Q9HDC5 661 aaPredicted RBP13.9□□□□□ -0.18
TRAIP-209ENST00000488860 NRBP1Q9UHY1 535 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 DDX41Q9UJV9 622 aaKnown RBP13.9□□□□□ -0.18
TRAIP-209ENST00000488860 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
TRAIP-209ENST00000488860 NFASCO94856 1347 aa13.9□□□□□ -0.19
TRAIP-209ENST00000488860 POTEMA6NI47 508 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 GH1P01241 217 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 TGFB3P10600 412 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 PRPHP41219 470 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 ARL6IP4Q66PJ3 421 aaKnown RBP13.89□□□□□ -0.19
TRAIP-209ENST00000488860 IQSEC1Q6DN90 963 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 CCDC62Q6P9F0 684 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 TLK2Q86UE8 772 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 KRI1Q8N9T8 703 aaKnown RBP13.89□□□□□ -0.19
TRAIP-209ENST00000488860 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
TRAIP-209ENST00000488860 CLIC6Q96NY7 704 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 RIT2Q99578 217 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 UNC45AQ9H3U1 944 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 BCAS3Q9H6U6 928 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 PRDM10Q9NQV6 1147 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 TBC1D22BQ9NU19 505 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 SLC9A2Q9UBY0 812 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 FBXO2Q9UK22 296 aaPredicted RBP13.89□□□□□ -0.19
TRAIP-209ENST00000488860 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 SAMM50Q9Y512 469 aa13.89□□□□□ -0.19
TRAIP-209ENST00000488860 NOP56O00567 594 aaKnown RBP13.88□□□□□ -0.19
TRAIP-209ENST00000488860 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAIP-209ENST00000488860 SEPT4O43236 478 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 PPP6R2O75170 966 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 PSMD10O75832 226 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 FARP2O94887 1054 aaPredicted RBP13.88□□□□□ -0.19
TRAIP-209ENST00000488860 KRT76Q01546 638 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 GRIN1Q05586 938 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 PKN2Q16513 984 aaKnown RBP13.88□□□□□ -0.19
TRAIP-209ENST00000488860 IL17AQ16552 155 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 DUSP28Q4G0W2 176 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 CELF3Q5SZQ8 465 aaKnown RBP13.88□□□□□ -0.19
TRAIP-209ENST00000488860 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 METTL7BQ6UX53 244 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 FERMT2Q96AC1 680 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 SPATA33Q96N06 139 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 RAB34Q9BZG1 259 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 HMX1Q9NP08 348 aaPredicted RBP13.88□□□□□ -0.19
TRAIP-209ENST00000488860 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 ELP1O95163 1332 aa13.88□□□□□ -0.19
TRAIP-209ENST00000488860 DHX15O43143 795 aaKnown RBP13.87□□□□□ -0.19
TRAIP-209ENST00000488860 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
TRAIP-209ENST00000488860 CUTAO60888 179 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
TRAIP-209ENST00000488860 RARBP10826 455 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAIP-209ENST00000488860 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 MIER3Q7Z3K6 550 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAIP-209ENST00000488860 AP5M1Q9H0R1 490 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 CSRNP2Q9H175 543 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 UNC93B1Q9H1C4 597 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 DDX20Q9UHI6 824 aaKnown RBP13.87□□□□□ -0.19
TRAIP-209ENST00000488860 PCDHA7Q9UN72 937 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 TELO2Q9Y4R8 837 aa13.87□□□□□ -0.19
TRAIP-209ENST00000488860 SRPRBQ9Y5M8 271 aaKnown RBP13.87□□□□□ -0.19
TRAIP-209ENST00000488860 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
TRAIP-209ENST00000488860 PP2D1A8MPX8 630 aa13.86□□□□□ -0.19
TRAIP-209ENST00000488860 WDR64B1ANS9 1081 aa13.86□□□□□ -0.19
TRAIP-209ENST00000488860 GOLGA6L22H0YM25 854 aa13.86□□□□□ -0.19
TRAIP-209ENST00000488860 EML1O00423 815 aa13.86□□□□□ -0.19
TRAIP-209ENST00000488860 CCNE2O96020 404 aa13.86□□□□□ -0.19
TRAIP-209ENST00000488860 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
TRAIP-209ENST00000488860 ACTR2P61160 394 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms