RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 DENND5AQ6IQ26 1287 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 SDE2Q6IQ49 451 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 ZBTB38Q8NAP3 1195 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 DNERQ8NFT8 737 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 THAP3Q8WTV1 239 aaPredicted RBP4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 OSBP2Q969R2 916 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 SGSM3Q96HU1 749 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 AARSD1Q9BTE6 412 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 IER2Q9BTL4 223 aa4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 TMA7Q9Y2S6 64 aaKnown RBP4.29□□□□□ -1.72
R3HDM1-219ENST00000488035 TRBV23OR9-2A0A075B6M9 112 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 BLACEA4D250 179 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 AGRPO00253 132 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 ARNTLO00327 626 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 NOP56O00567 594 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 MUSKO15146 869 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 PRODHO43272 600 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 DLX3O60479 287 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 GFRA1P56159 465 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 AMPD2Q01433 879 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 SCRN1Q12765 414 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 GRB10Q13322 594 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 TKFCQ3LXA3 575 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 ZNF585AQ6P3V2 769 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 CD300LDQ6UXZ3 194 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 ZNF575Q86XF7 245 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 DCP2Q8IU60 420 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 TMEM145Q8NBT3 493 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 C1orf159Q96HA4 380 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 MTA3Q9BTC8 594 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 AP5M1Q9H0R1 490 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 NKX2-4Q9H2Z4 354 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 NGRNQ9NPE2 291 aaKnown RBP4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 GPRC5CQ9NQ84 441 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 JADE2Q9NQC1 790 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 FANCLQ9NW38 375 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 TMEM260Q9NX78 707 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.28□□□□□ -1.728e-7■■■■□ 22.9
R3HDM1-219ENST00000488035 C11orf21Q9P2W6 132 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 TESMINQ9Y4I5 508 aa4.28□□□□□ -1.72
R3HDM1-219ENST00000488035 CADPSQ9ULU8 1353 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 WDR33Q9C0J8 1336 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 TRAV20A0A0B4J274 112 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 IQCA1LA6NCM1 817 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 AURKAO14965 403 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 PPP1R12AO14974 1030 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 B4GALT3O60512 393 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 CYP1A1P04798 512 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 THBDP07204 575 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 SNRPB2P08579 225 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 PABPC1P11940 636 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 ECI1P42126 302 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 SEPHS1P49903 392 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 PPP2CBP62714 309 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 PPP2CAP67775 309 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 HNRNPA0Q13151 305 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 HSP90AA2PQ14568 343 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 NTRK3Q16288 839 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 SMN1Q16637 294 aaKnown RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 PRR31Q5SQ13 230 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 PRAMEF18Q5VWM3 479 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 MBLAC2Q68D91 279 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 ZNF662Q6ZS27 426 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 ARHGEF18Q6ZSZ5 1173 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 PALM2Q8IXS6 379 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 FAM177A1Q8N128 213 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 COPS5Q92905 334 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 ZNF341Q9BYN7 854 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 FBLN5Q9UBX5 448 aa4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 TMEFF2Q9UIK5 374 aaPredicted RBP4.27□□□□□ -1.73
R3HDM1-219ENST00000488035 SHROOM4Q9ULL8 1493 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 TRBV23-1A0A0A0MS06 115 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 C2orf71A6NGG8 1288 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 ENPP3O14638 875 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 GPR42O15529 346 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 NPHS1O60500 1241 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 C6orf222P0C671 652 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 FGFR1P11362 822 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 EPHB4P54760 987 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 ITGA1P56199 1179 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 INHBEP58166 350 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 FHL2Q14192 279 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 SLC35F1Q5T1Q4 408 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 SLFN13Q68D06 897 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 POMZP3Q6PJE2 187 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 NSMFQ6X4W1 530 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 MIB1Q86YT6 1006 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 CCDC103Q8IW40 242 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 CRACR2BQ8N4Y2 399 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 KREMEN2Q8NCW0 462 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 NPLOC4Q8TAT6 608 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 IGDCC4Q8TDY8 1250 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 FRS2Q8WU20 508 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 CYP26B1Q9NR63 512 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 GULP1Q9UBP9 304 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 ING1Q9UK53 422 aaPredicted RBP4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 MRPS23Q9Y3D9 190 aaKnown RBP4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 BACE2Q9Y5Z0 518 aa4.26□□□□□ -1.73
R3HDM1-219ENST00000488035 PATE3B3GLJ2 98 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms