RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 RAET1EQ8TD07 263 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 MRPS27Q92552 414 aaKnown RBP12.44□□□□□ -0.42
HDLBP-242ENST00000488013 HAS1Q92839 578 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 GDPD2Q9HCC8 539 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 LRWD1Q9UFC0 647 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 CCDC39Q9UFE4 941 aa12.44□□□□□ -0.42
HDLBP-242ENST00000488013 DKC1O60832 514 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDLBP-242ENST00000488013 PSMD10O75832 226 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 ARP10275 920 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 TECP42680 631 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 PRKCZQ05513 592 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 ACVR2BQ13705 512 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 LAMC2Q13753 1193 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 METTL7BQ6UX53 244 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 OTOP1Q7RTM1 612 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 NPLOC4Q8TAT6 608 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 CD99L2Q8TCZ2 262 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 CCSER1Q9C0I3 900 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 NT5C3AQ9H0P0 336 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-242ENST00000488013 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
HDLBP-242ENST00000488013 KDM3AQ9Y4C1 1321 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 FAM237AA0A1B0GTK4 181 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 WDR64B1ANS9 1081 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 RGS20O76081 388 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 SNAI1O95863 264 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-242ENST00000488013 IGHA2P01877 340 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 KCNA2P16389 499 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 CTGFP29279 349 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 BRDTQ58F21 947 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-242ENST00000488013 RESP18Q5W5W9 173 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 SLAIN1Q8ND83 568 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 RASSF8Q8NHQ8 419 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-242ENST00000488013 CALML4Q96GE6 196 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 ARHGAP39Q9C0H5 1083 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 CSRNP2Q9H175 543 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 MLXIPQ9HAP2 919 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 LMBRD1Q9NUN5 540 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
HDLBP-242ENST00000488013 DDX41Q9UJV9 622 aaKnown RBP12.42□□□□□ -0.42
HDLBP-242ENST00000488013 FAM184BQ9ULE4 1060 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 Q9Y3F1 56 aa12.42□□□□□ -0.42
HDLBP-242ENST00000488013 MYH6P13533 1939 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 HMGCRP04035 888 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 TXNP10599 105 aaKnown RBP12.41□□□□□ -0.42
HDLBP-242ENST00000488013 CTCFP49711 727 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-242ENST00000488013 FAM160A1Q05DH4 1040 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 EPHA7Q15375 998 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 NFKBIBQ15653 356 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 PKN2Q16513 984 aaKnown RBP12.41□□□□□ -0.42
HDLBP-242ENST00000488013 DUSP28Q4G0W2 176 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 KANK3Q6NY19 840 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 MIS18BP1Q6P0N0 1132 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 FBXO16Q8IX29 292 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-242ENST00000488013 FSIP1Q8NA03 581 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 IQUBQ8NA54 791 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-242ENST00000488013 CDK5RAP3Q96JB5 506 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 CHAMP1Q96JM3 812 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 ANP32EQ9BTT0 268 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 CUEDC2Q9H467 287 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 MAGEF1Q9HAY2 307 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 TUFT1Q9NNX1 390 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 SLC9A2Q9UBY0 812 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 VAV3Q9UKW4 847 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 ZHX1Q9UKY1 873 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-242ENST00000488013 KCNH3Q9ULD8 1083 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 PCDHA10Q9Y5I2 948 aa12.41□□□□□ -0.42
HDLBP-242ENST00000488013 NOP56O00567 594 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 DHX15O43143 795 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 ADCY3O60266 1144 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 MSCO60682 206 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 GH1P01241 217 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 PSAPP07602 524 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 AKR1A1P14550 325 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 UBA1P22314 1058 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 RPA1P27694 616 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 SYKP43405 635 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 SPIRE1Q08AE8 756 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 ITGB3BPQ13352 177 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 IL17AQ16552 155 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 TAPT1Q6NXT6 567 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 SHC4Q6S5L8 630 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 B3GNT9Q6UX72 402 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 EEPD1Q7L9B9 569 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 MIER3Q7Z3K6 550 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 DHX37Q8IY37 1157 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 SYMPKQ92797 1274 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 ATP6V0A1Q93050 837 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 TIGD1Q96MW7 591 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 CLIC6Q96NY7 704 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 POLR3CQ9BUI4 534 aaPredicted RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 KATNBL1Q9H079 304 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms