RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.347e-7■■■□□ 17.3
TRA2B-214ENST00000487615 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 PRKG1Q13976 671 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 ANKRD40Q6AI12 368 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 HOOK3Q86VS8 718 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 UBLCP1Q8WVY7 318 aaPredicted RBP12.95□□□□□ -0.34
TRA2B-214ENST00000487615 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 WDR24Q96S15 920 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 UTP11Q9Y3A2 253 aaKnown RBP12.95□□□□□ -0.34
TRA2B-214ENST00000487615 CEP83Q9Y592 693 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 PCDHA13Q9Y5I0 950 aa12.95□□□□□ -0.34
TRA2B-214ENST00000487615 PRPF6O94906 941 aaKnown RBP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 SERPING1P05155 500 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 FXR1P51114 621 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 EHHADHQ08426 723 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 CALCOCO2Q13137 446 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 GIMAP8Q8ND71 665 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 FERP16591 822 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 ZEB2O60315 1214 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 PPFIA1Q13136 1202 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 CTTNQ14247 550 aaKnown RBP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 STK4Q13043 487 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 PPP1R7Q15435 360 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 NYAP2Q9P242 653 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 HERC5Q9UII4 1024 aaKnown RBP12.94□□□□□ -0.34
TRA2B-214ENST00000487615 CAPN11Q9UMQ6 739 aa12.94□□□□□ -0.34
TRA2B-214ENST00000487615 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 EBAG9O00559 213 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 MAP2K1Q02750 393 aaPredicted RBP12.93□□□□□ -0.34
TRA2B-214ENST00000487615 POTEGQ6S5H5 508 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 POTEEQ6S8J3 1075 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 GCNT4Q9P109 453 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 MOCS3O95396 460 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
TRA2B-214ENST00000487615 SFR1Q86XK3 245 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
TRA2B-214ENST00000487615 ADAMTSL3P82987 1691 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 FOXP2O15409 715 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 PNMA6AP0CW24 399 aaPredicted RBP12.93□□□□□ -0.34
TRA2B-214ENST00000487615 HSPA1LP34931 641 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 MYL7Q01449 175 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 CLUL1Q15846 466 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 HPS3Q969F9 1004 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 TRIM31Q9BZY9 425 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 JMJD4Q9H9V9 463 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 MED4Q9NPJ6 270 aa12.93□□□□□ -0.34
TRA2B-214ENST00000487615 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 DMP1Q13316 513 aaPredicted RBP12.92□□□□□ -0.34
TRA2B-214ENST00000487615 PLEKHA4Q9H4M7 779 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 PDE11AQ9HCR9 933 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 LRRC53A6NM62 1247 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
TRA2B-214ENST00000487615 CD44P16070 742 aaKnown RBP12.92□□□□□ -0.34
TRA2B-214ENST00000487615 PTPROQ16827 1216 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 PIGOQ8TEQ8 1089 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 CCDC127Q96BQ5 260 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 IRX2Q9BZI1 471 aaPredicted RBP12.92□□□□□ -0.34
TRA2B-214ENST00000487615 STMN4Q9H169 189 aaPredicted RBP12.92□□□□□ -0.34
TRA2B-214ENST00000487615 IL17RBQ9NRM6 502 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 CEP72Q9P209 647 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 MRFAP1Q9Y605 127 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 FAM205AQ6ZU69 1335 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 FAM237AA0A1B0GTK4 181 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 GYPCP04921 128 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 IL1R1P14778 569 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 ACTN2P35609 894 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 USP14P54578 494 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 NAALADL2Q58DX5 795 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 CCDC25Q86WR0 208 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 PPM1KQ8N3J5 372 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 CCDC77Q9BR77 488 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 ZNF341Q9BYN7 854 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 NOP56O00567 594 aaKnown RBP12.92□□□□□ -0.34
TRA2B-214ENST00000487615 TNNI1P19237 187 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 LMNB1P20700 586 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 STAT3P40763 770 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 RASGRP2Q7LDG7 609 aa12.92□□□□□ -0.34
TRA2B-214ENST00000487615 ANO9A1A5B4 782 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 KRIT1O00522 736 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 NDUFB10O96000 172 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 RAD9BQ6WBX8 426 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 AZI2Q9H6S1 392 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 TMEM206Q9H813 350 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 MYMKA6NI61 221 aa12.91□□□□□ -0.34
TRA2B-214ENST00000487615 EIF3CLB5ME19 914 aaKnown RBP12.91□□□□□ -0.34
TRA2B-214ENST00000487615 H0YCG3 227 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms