RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 CDHR1Q96JP9 859 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 GUCD1Q96NT3 240 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 GPR20Q99678 358 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 TM6SF1Q9BZW5 370 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 TUT1Q9H6E5 874 aaKnown RBP13.12□□□□□ -0.31
SPEN-205ENST00000487496 EHMT1Q9H9B1 1298 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 CXXC1Q9P0U4 656 aaPredicted RBP13.12□□□□□ -0.31
SPEN-205ENST00000487496 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
SPEN-205ENST00000487496 GRXCR1A8MXD5 290 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 MAFGO15525 162 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 PRPF3O43395 683 aaKnown RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 PFKMP08237 780 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 SCG2P13521 617 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 KCNA2P16389 499 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 RFC2P35250 354 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 ZNF200P98182 395 aaPredicted RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 MTMR1Q13613 665 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 TOB2Q14106 344 aaPredicted RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 HIC1Q14526 733 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 PKN1Q16512 942 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 DHX38Q92620 1227 aaKnown RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 PHKBQ93100 1093 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 UPF3BQ9BZI7 483 aaKnown RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 MTIF3Q9H2K0 278 aaKnown RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
SPEN-205ENST00000487496 JADE2Q9NQC1 790 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 STXBP5LQ9Y2K9 1186 aa13.11□□□□□ -0.31
SPEN-205ENST00000487496 SELPP16109 830 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 IFNAR1P17181 557 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 DNAJB2P25686 324 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 CLK2P49760 499 aaKnown RBP13.1□□□□□ -0.31
SPEN-205ENST00000487496 CCT2P78371 535 aaKnown RBP13.1□□□□□ -0.31
SPEN-205ENST00000487496 SP4Q02446 784 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 RBL2Q08999 1139 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 AP3B2Q13367 1082 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 CCDC155Q8N6L0 562 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 CYP2W1Q8TAV3 490 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 AFAP1L1Q8TED9 768 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 MXRA8Q9BRK3 442 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 ZMYND12Q9H0C1 365 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 TMEM260Q9NX78 707 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 PKD2L1Q9P0L9 805 aa13.1□□□□□ -0.31
SPEN-205ENST00000487496 TMEM265A0A087WTH1 108 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 PPFIA3O75145 1194 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 SMIM10L2AP0DMW4 78 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 SMIM10L2BP0DMW5 78 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 CKBP12277 381 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 HOXC8P31273 242 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 SREBF1P36956 1147 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 PBX2P40425 430 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
SPEN-205ENST00000487496 PTK7Q13308 1070 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 UTP14CQ5TAP6 766 aaKnown RBP13.09□□□□□ -0.31
SPEN-205ENST00000487496 JAKMIP3Q5VZ66 844 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 WNT8BQ93098 351 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 TIFAQ96CG3 184 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 CDX2Q99626 313 aaPredicted RBP13.09□□□□□ -0.31
SPEN-205ENST00000487496 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
SPEN-205ENST00000487496 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 RNF26Q9BY78 433 aaPredicted RBP13.09□□□□□ -0.31
SPEN-205ENST00000487496 PBX4Q9BYU1 374 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 RNPEPQ9H4A4 650 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
SPEN-205ENST00000487496 KCNH7Q9NS40 1196 aa13.09□□□□□ -0.31
SPEN-205ENST00000487496 GSTTP1A0A1W2PQM5 241 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 C17orf102A2RUQ5 167 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 ZBBXA8MT70 800 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 ADAMTS3O15072 1205 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
SPEN-205ENST00000487496 GPNMBQ14956 572 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
SPEN-205ENST00000487496 CEP55Q53EZ4 464 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 LRRC8DQ7L1W4 858 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 CCDC12Q8WUD4 166 aaPredicted RBP13.08□□□□□ -0.32
SPEN-205ENST00000487496 SEPT1Q8WYJ6 367 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
SPEN-205ENST00000487496 FTOQ9C0B1 505 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPEN-205ENST00000487496 C6orf50Q9HD87 102 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.32
SPEN-205ENST00000487496 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
SPEN-205ENST00000487496 MEIS1O00470 390 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 PARNO95453 639 aaKnown RBP13.07□□□□□ -0.32
SPEN-205ENST00000487496 ARP10275 920 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 ACTN1P12814 892 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 GNA11P29992 359 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 ARHGAP4P98171 946 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 ZNF618Q5T7W0 954 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 TRAF7Q6Q0C0 670 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms