RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 TSEN34Q9BSV6 310 aaKnown RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 VTA1Q9NP79 307 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 RTEL1Q9NZ71 1219 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 ZHX1Q9UKY1 873 aaPredicted RBP12.18□□□□□ -0.46
TOP3B-216ENST00000487485 TBX21Q9UL17 535 aa12.18□□□□□ -0.46
TOP3B-216ENST00000487485 PRRC2BQ5JSZ5 2229 aaKnown RBP12.17□□□□□ -0.46
TOP3B-216ENST00000487485 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 MYADML2A6NDP7 307 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 STAM2O75886 525 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 SREBF1P36956 1147 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 NR5A1Q13285 461 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 CCDC144BQ3MJ40 725 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 RASIP1Q5U651 963 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 CCSAPQ6IQ19 270 aaPredicted RBP12.17□□□□□ -0.46
TOP3B-216ENST00000487485 MFSD5Q6N075 450 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 XRRA1Q6P2D8 792 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 SEPT14Q6ZU15 432 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 KRT25Q7Z3Z0 450 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 FBXO16Q8IX29 292 aaPredicted RBP12.17□□□□□ -0.46
TOP3B-216ENST00000487485 ADAMTS19Q8TE59 1207 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 PDGFCQ9NRA1 345 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 THEGQ9P2T0 379 aa12.17□□□□□ -0.46
TOP3B-216ENST00000487485 SYNRGQ9UMZ2 1314 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 RBM47A0AV96 593 aaKnown RBP12.16□□□□□ -0.46
TOP3B-216ENST00000487485 H3BQV1 296 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 ACRP10323 421 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 CSF2RAP15509 400 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 CDK7P50613 346 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 MRPS5P82675 430 aaKnown RBP12.16□□□□□ -0.46
TOP3B-216ENST00000487485 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 PPIGQ13427 754 aaKnown RBP eCLIP12.16□□□□□ -0.464e-7■□□□□ 9.8
TOP3B-216ENST00000487485 GNL2Q13823 731 aaKnown RBP12.16□□□□□ -0.46
TOP3B-216ENST00000487485 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.46
TOP3B-216ENST00000487485 EARS2Q5JPH6 523 aaKnown RBP12.16□□□□□ -0.46
TOP3B-216ENST00000487485 PIK3AP1Q6ZUJ8 805 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 ZNF365Q70YC5 407 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 TNFRSF25Q93038 417 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
TOP3B-216ENST00000487485 DOCK5Q9H7D0 1870 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 MOXD2PA6NHM9 499 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 RGS20O76081 388 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 CYP3A4P08684 503 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 PDCP20941 246 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 IGFBP4P22692 258 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 ZNF76P36508 570 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 USP11P51784 963 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 INF2Q27J81 1249 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 GNPTABQ3T906 1256 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 UHRF1Q96T88 793 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-216ENST00000487485 MXRA8Q9BRK3 442 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 WDR11Q9BZH6 1224 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-216ENST00000487485 UBIAD1Q9Y5Z9 338 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 PIEZO1Q92508 2521 aa12.15□□□□□ -0.46
TOP3B-216ENST00000487485 REV3LO60673 3130 aa12.15□□□□□ -0.47
TOP3B-216ENST00000487485 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 VPS37CA5D8V6 355 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 KIF28PB7ZC32 967 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 ADCY6O43306 1168 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 EDIL3O43854 480 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 DUSP11O75319 330 aaKnown RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 TXNP10599 105 aaKnown RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 SMPD1P17405 629 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 ITGB5P18084 799 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 SYT1P21579 422 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 ANP32AP39687 249 aaKnown RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 PLA2G5P39877 138 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 TTLL4Q14679 1199 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 MCTP1Q6DN14 999 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 CYP2W1Q8TAV3 490 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 SCFD2Q8WU76 684 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 VTI1AQ96AJ9 217 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 NECAB3Q96P71 396 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 INPP4AQ96PE3 977 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
TOP3B-216ENST00000487485 MRVI1Q9Y6F6 885 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 BRWD1Q9NSI6 2320 aa12.14□□□□□ -0.47
TOP3B-216ENST00000487485 ELP1O95163 1332 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 SPATA31C2B4DYI2 1134 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 FAM86B1E9PN63 330 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 ARVCFO00192 962 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 MAFGO15525 162 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 FIBPO43427 364 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 ARIH2O95376 493 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 ASGR1P07306 291 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 FAM86B2P0C5J1 330 aa12.13□□□□□ -0.47
TOP3B-216ENST00000487485 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms