RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 GPRASP2Q96D09 838 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 VWCEQ96DN2 955 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 CDHR1Q96JP9 859 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 CTAGE1Q96RT6 745 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 USP26Q9BXU7 913 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 AGXT2Q9BYV1 514 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 RIC8AQ9NPQ8 531 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 CXXC1Q9P0U4 656 aaPredicted RBP14.28□□□□□ -0.12
ITSN1-229ENST00000487427 SCN10AQ9Y5Y9 1956 aa14.28□□□□□ -0.12
ITSN1-229ENST00000487427 H3BRB1 525 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 MAFGO15525 162 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 FOSP01100 380 aaPredicted RBP14.27□□□□□ -0.13
ITSN1-229ENST00000487427 ITGB5P18084 799 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 DNAJB2P25686 324 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 TYW1BQ6NUM6 668 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 GUCD1Q96NT3 240 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 GPR20Q99678 358 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 TTYH1Q9H313 450 aaPredicted RBP14.27□□□□□ -0.13
ITSN1-229ENST00000487427 TUT1Q9H6E5 874 aaKnown RBP14.27□□□□□ -0.13
ITSN1-229ENST00000487427 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 UBIAD1Q9Y5Z9 338 aa14.27□□□□□ -0.13
ITSN1-229ENST00000487427 LAMA2P24043 3122 aaKnown RBP14.26□□□□□ -0.13
ITSN1-229ENST00000487427 SMCO2A6NFE2 343 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 GRXCR1A8MXD5 290 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 STXBP3O00186 592 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 LGALS2P05162 132 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 ADCY7P51828 1080 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 EVCP57679 992 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 RBL2Q08999 1139 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 PTK7Q13308 1070 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 RUFY3Q7L099 469 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 DEFB128Q7Z7B8 93 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 AFAP1L1Q8TED9 768 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 TIFAQ96CG3 184 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 CDX2Q99626 313 aaPredicted RBP14.26□□□□□ -0.13
ITSN1-229ENST00000487427 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 SLC4A7Q9Y6M7 1214 aa14.26□□□□□ -0.13
ITSN1-229ENST00000487427 KIAA1217Q5T5P2 1943 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 ATP9AO75110 1047 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 PARNO95453 639 aaKnown RBP14.25□□□□□ -0.13
ITSN1-229ENST00000487427 ACTN1P12814 892 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 SELPP16109 830 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 MTMR1Q13613 665 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 PFKFB3Q16875 520 aaPredicted RBP14.25□□□□□ -0.13
ITSN1-229ENST00000487427 DHX38Q92620 1227 aaKnown RBP14.25□□□□□ -0.13
ITSN1-229ENST00000487427 PBX4Q9BYU1 374 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 FTOQ9C0B1 505 aaKnown RBP eCLIP14.25□□□□□ -0.13
ITSN1-229ENST00000487427 JADE2Q9NQC1 790 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 MSRAQ9UJ68 235 aa14.25□□□□□ -0.13
ITSN1-229ENST00000487427 PRPF3O43395 683 aaKnown RBP14.24□□□□□ -0.13
ITSN1-229ENST00000487427 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
ITSN1-229ENST00000487427 CKBP12277 381 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 SCG2P13521 617 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 KCNA2P16389 499 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 PDIA3P30101 505 aaKnown RBP14.24□□□□□ -0.13
ITSN1-229ENST00000487427 PBX2P40425 430 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 ZNF200P98182 395 aaPredicted RBP14.24□□□□□ -0.13
ITSN1-229ENST00000487427 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
ITSN1-229ENST00000487427 RAB30Q15771 203 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 LRRC8DQ7L1W4 858 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 SEPT1Q8WYJ6 367 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 MXRA8Q9BRK3 442 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 TM6SF1Q9BZW5 370 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 ZNF576Q9H609 170 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 ZNF215Q9UL58 517 aaPredicted RBP14.24□□□□□ -0.13
ITSN1-229ENST00000487427 CYP46A1Q9Y6A2 500 aa14.24□□□□□ -0.13
ITSN1-229ENST00000487427 NID2Q14112 1375 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 C17orf102A2RUQ5 167 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 ZBBXA8MT70 800 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 SMIM10L2AP0DMW4 78 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 SMIM10L2BP0DMW5 78 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 GNAT1P11488 350 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 ATP2A2P16615 1042 aaKnown RBP14.23□□□□□ -0.13
ITSN1-229ENST00000487427 HOXC8P31273 242 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 SP4Q02446 784 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 AP3B2Q13367 1082 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 HIC1Q14526 733 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 NTRK3Q16288 839 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 TRIM71Q2Q1W2 868 aaKnown RBP14.23□□□□□ -0.13
ITSN1-229ENST00000487427 UTP14CQ5TAP6 766 aaKnown RBP14.23□□□□□ -0.13
ITSN1-229ENST00000487427 MCTP2Q6DN12 878 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 SERINC5Q86VE9 423 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 SLC17A8Q8NDX2 589 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 CCDC12Q8WUD4 166 aaPredicted RBP14.23□□□□□ -0.13
ITSN1-229ENST00000487427 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 RNPEPQ9H4A4 650 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 KCNH7Q9NS40 1196 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 TELO2Q9Y4R8 837 aa14.23□□□□□ -0.13
ITSN1-229ENST00000487427 ESYT2A0FGR8 921 aa14.22□□□□□ -0.13
ITSN1-229ENST00000487427 IFNAR1P17181 557 aa14.22□□□□□ -0.13
ITSN1-229ENST00000487427 TCF7P36402 384 aaPredicted RBP14.22□□□□□ -0.13
ITSN1-229ENST00000487427 SREBF1P36956 1147 aa14.22□□□□□ -0.13
ITSN1-229ENST00000487427 CLK2P49760 499 aaKnown RBP14.22□□□□□ -0.13
ITSN1-229ENST00000487427 TOB2Q14106 344 aaPredicted RBP14.22□□□□□ -0.13
ITSN1-229ENST00000487427 GPNMBQ14956 572 aa14.22□□□□□ -0.13
ITSN1-229ENST00000487427 GRIN2CQ14957 1233 aa14.22□□□□□ -0.13
ITSN1-229ENST00000487427 PKN1Q16512 942 aa14.22□□□□□ -0.13
ITSN1-229ENST00000487427 CEP55Q53EZ4 464 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms