RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
VAMP3-203ENST00000487194 BLOC1S4Q9NUP1 217 aa6.89□□□□□ -1.31
VAMP3-203ENST00000487194 BTBD7Q9P203 1132 aa6.89□□□□□ -1.31
VAMP3-203ENST00000487194 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
VAMP3-203ENST00000487194 KIAA1024Q9UPX6 916 aa6.89□□□□□ -1.31
VAMP3-203ENST00000487194 DNM3Q9UQ16 869 aa6.89□□□□□ -1.31
VAMP3-203ENST00000487194 A0A0G2JMZ2 1700 aa6.89□□□□□ -1.31
VAMP3-203ENST00000487194 COL11A1P12107 1806 aaPredicted RBP6.89□□□□□ -1.31
VAMP3-203ENST00000487194 A0A087WWV3 80 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 CCL15-CCL14A0A0B4J2E2 113 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 LOC102724159A0A0B4J2E5 919 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 GOLGA6L6A8MZA4 724 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 POTEB2H3BUK9 544 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 KLRC4O43908 158 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 MED24O75448 989 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 CNMDO75829 334 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 PLA2G4BP0C869 781 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 SPATA31C1P0DKV0 1188 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 BMP6P22004 513 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 CASP1P29466 404 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 SFNP31947 248 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 GJA5P36382 358 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 GCLCP48506 637 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 ASIC1P78348 528 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 MRPS9P82933 396 aaKnown RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 KRT76Q01546 638 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 PSMD2Q13200 908 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 MCM6Q14566 821 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 PWP2Q15269 919 aaKnown RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 STXBP2Q15833 593 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 CCL15Q16663 113 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 KMT5BQ4FZB7 885 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 COBLL1Q53SF7 1204 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 HS1BP3Q53T59 392 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 B3GNT9Q6UX72 402 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 UNC13DQ70J99 1090 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 MIER3Q7Z3K6 550 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 ANKRD23Q86SG2 305 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 NCAPG2Q86XI2 1143 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 CATSPER3Q86XQ3 398 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 GIMAP8Q8ND71 665 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 RDM1Q8NG50 284 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 IL31RAQ8NI17 732 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 MS4A4AQ96JQ5 239 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 INPP4AQ96PE3 977 aaPredicted RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 HSD17B14Q9BPX1 270 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 NUDT12Q9BQG2 462 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 EIF2AK1Q9BQI3 630 aaKnown RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 PAGR1Q9BTK6 254 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 MOV10L1Q9BXT6 1211 aaKnown RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 TRIM5Q9C035 493 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 AGO4Q9HCK5 861 aaKnown RBP6.88□□□□□ -1.31
VAMP3-203ENST00000487194 NMRK2Q9NPI5 230 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 EXOC1Q9NV70 894 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 RBPJLQ9UBG7 517 aa6.88□□□□□ -1.31
VAMP3-203ENST00000487194 NFASCO94856 1347 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 SYNRGQ9UMZ2 1314 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 POTEB3A0JP26 581 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 TESPA1A2RU30 521 aaPredicted RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 MYMKA6NI61 221 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 PPP1R3GB7ZBB8 358 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 BTBD19C9JJ37 291 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 E9PMD0 336 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 PDHXO00330 501 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 EML1O00423 815 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 PSMA7O14818 248 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 CBFA2T2O43439 604 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 CHMP2AO43633 222 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 DKC1O60832 514 aaKnown RBP eCLIP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 EIF3JO75822 258 aaKnown RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 KIF20AO95235 890 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 EYA4O95677 639 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 ITGBL1O95965 494 aaPredicted RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 SSBP05455 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 KRT18P05783 430 aaKnown RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 TPM3P06753 285 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 P4HBP07237 508 aaKnown RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 ERCC3P19447 782 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 CDC25BP30305 580 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 ZNF75DP51815 510 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 JAK3P52333 1124 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 HUNKP57058 714 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 ERVK-9P63128 1117 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 ERVK-24P63145 666 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 FMR1Q06787 632 aaKnown RBP eCLIP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 PDE4DQ08499 809 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 PAK1Q13153 545 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 DHX8Q14562 1220 aaKnown RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 KCTD2Q14681 263 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 NCAPHQ15003 741 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 ECM1Q16610 540 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 TPD52L1Q16890 204 aaPredicted RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 SPATA1Q5VX52 437 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 SPRYD7Q5W111 196 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 POTEBQ6S5H4 581 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 CCDC65Q8IXS2 484 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 ADSSL1Q8N142 457 aa6.87□□□□□ -1.31
VAMP3-203ENST00000487194 SYT2Q8N9I0 419 aaPredicted RBP6.87□□□□□ -1.31
VAMP3-203ENST00000487194 GPRC5AQ8NFJ5 357 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms