RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 BICRALQ6AI39 1079 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 HHIPL2Q6UWX4 724 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 NLRX1Q86UT6 975 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 SIRT2Q8IXJ6 389 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 BOCQ9BWV1 1114 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 TRIM8Q9BZR9 551 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 EMC7Q9NPA0 242 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 CRTAC1Q9NQ79 661 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 OXSMQ9NWU1 459 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 GPR160Q9UJ42 338 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 DSEQ9UL01 958 aa6.78□□□□□ -1.32
PRPF38A-203ENST00000487160 MAN2B1O00754 1011 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 OCRLQ01968 901 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 ITKQ08881 620 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 MTMR1Q13613 665 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 ODR4Q5SWX8 454 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 FSTL4Q6MZW2 842 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 CABP7Q86V35 215 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 AGBL5Q8NDL9 886 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 MYLIPQ8WY64 445 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 SHISA4Q96DD7 197 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 CD244Q9BZW8 370 aa6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 PUS7LQ9H0K6 701 aaKnown RBP6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 CCDC8Q9H0W5 538 aaPredicted RBP6.77□□□□□ -1.33
PRPF38A-203ENST00000487160 KRIT1O00522 736 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 SLC27A2O14975 620 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 PRKD3O94806 890 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 PARNO95453 639 aaKnown RBP6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 GLI4P10075 376 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 IRF9Q00978 393 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 STEAP3Q658P3 488 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 IQSEC1Q6DN90 963 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 EP400NLQ6ZTU2 488 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 C11orf74Q86VG3 221 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 LILRA2Q8N149 483 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 UHMK1Q8TAS1 419 aaKnown RBP6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 JDP2Q8WYK2 163 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 MTMR8Q96EF0 704 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 ASPSCR1Q9BZE9 553 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 RXFP1Q9HBX9 757 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 SRPK3Q9UPE1 567 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 CTNND2Q9UQB3 1225 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 SIT1Q9Y3P8 196 aa6.76□□□□□ -1.33
PRPF38A-203ENST00000487160 NACADO15069 1562 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 H7C1D1 291 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 SCDO00767 359 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 DVL2O14641 736 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 HGSO14964 777 aaPredicted RBP6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 TGM5O43548 720 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 ALDH1L1O75891 902 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 RAC2P15153 192 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 PNLIPP16233 465 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 SLC9A1P19634 815 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 ZNF792Q3KQV3 632 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 EMC4Q5J8M3 183 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 CPZQ66K79 652 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 NOSTRINQ8IVI9 506 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 NLGN4XQ8N0W4 816 aa6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 THRAP3Q9Y2W1 955 aaKnown RBP6.75□□□□□ -1.33
PRPF38A-203ENST00000487160 SGSM2O43147 1006 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 TADA3O75528 432 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 LTFP02788 710 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 DBHP09172 617 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 ARL4AP40617 200 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 SLC6A11P48066 632 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 KIF11P52732 1056 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 SNX17Q15036 470 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 SEC23AQ15436 765 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 ZNF174Q15697 407 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 CHRNA2Q15822 529 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 HDGFL2Q7Z4V5 671 aaPredicted RBP6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 DCP2Q8IU60 420 aaKnown RBP6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 EFHBQ8N7U6 833 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 KIAA1958Q8N8K9 716 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 NETO2Q8NC67 525 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 SMOC1Q9H4F8 434 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 RC3H2Q9HBD1 1191 aaKnown RBP6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 VTA1Q9NP79 307 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 TELO2Q9Y4R8 837 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 ATP23Q9Y6H3 246 aa6.74□□□□□ -1.33
PRPF38A-203ENST00000487160 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 ZC3H12DA2A288 527 aaKnown RBP6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 MAFKO60675 156 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 CLASP2O75122 1294 aaKnown RBP6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 HIP1RO75146 1068 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 ULK1O75385 1050 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 TTF1Q15361 905 aaPredicted RBP6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 FIGNQ5HY92 759 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 KCTD1Q719H9 257 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 RAVER1Q8IY67 606 aaKnown RBP6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 ABHD4Q8TB40 342 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 CLEC4DQ8WXI8 215 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 SEC14L1Q92503 715 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 SLC5A5Q92911 643 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 ELF4Q99607 663 aaPredicted RBP6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 TNFRSF12AQ9NP84 129 aa6.73□□□□□ -1.33
PRPF38A-203ENST00000487160 TRHDEQ9UKU6 1024 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms