RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 SCGB1D2O95969 90 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 ATP2A2P16615 1042 aaKnown RBP5.32□□□□□ -1.56
PTCD3-216ENST00000487043 GRK2P25098 689 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 GRK3P35626 688 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 TBX4P57082 545 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 SYDE2Q5VT97 1194 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 RNF111Q6ZNA4 994 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 OVCH1Q7RTY7 1134 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 ZBTB46Q86UZ6 589 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 CREG2Q8IUH2 290 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 CHST14Q8NCH0 376 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 ASB11Q8WXH4 323 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 C8orf48Q96LL4 319 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 KCNJ15Q99712 375 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 CATSPERZQ9NTU4 200 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 SPTLC3Q9NUV7 552 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 BTG4Q9NY30 223 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 ZIM2Q9NZV7 527 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 B4GALT6Q9UBX8 382 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 FBXL7Q9UJT9 491 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 PCDHA11Q9Y5I1 949 aa5.32□□□□□ -1.56
PTCD3-216ENST00000487043 FHAD1B1AJZ9 1412 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 PBRM1Q86U86 1689 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 EIF4G3O43432 1585 aaKnown RBP5.31□□□□□ -1.56
PTCD3-216ENST00000487043 CCDC194A0A1B0GVG4 234 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 C7orf72A4D263 438 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 GABRDO14764 452 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 GSTA4O15217 222 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 AKAP10O43572 662 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 PRC1O43663 620 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 RPL10P27635 214 aaKnown RBP5.31□□□□□ -1.56
PTCD3-216ENST00000487043 LSSP48449 732 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 KPNA1P52294 538 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-216ENST00000487043 ZP2Q05996 745 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 LSAMPQ13449 338 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 GAB4Q2WGN9 574 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 HDGFL2Q7Z4V5 671 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-216ENST00000487043 WAPLQ7Z5K2 1190 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 THAP5Q7Z6K1 395 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 C11orf74Q86VG3 221 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 PASD1Q8IV76 773 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 CCDC146Q8IYE0 955 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 C2orf69Q8N8R5 385 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 FLAD1Q8NFF5 587 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 CHMP4CQ96CF2 233 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 HOOK2Q96ED9 719 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 EMC7Q9NPA0 242 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 GEMIN8Q9NWZ8 242 aaKnown RBP5.31□□□□□ -1.56
PTCD3-216ENST00000487043 CLDND1Q9NY35 253 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 H2AFY2Q9P0M6 372 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-216ENST00000487043 CBLCQ9ULV8 474 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 TIMM13Q9Y5L4 95 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-216ENST00000487043 SNX11Q9Y5W9 270 aa5.31□□□□□ -1.56
PTCD3-216ENST00000487043 TNKSO95271 1327 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 TMEM82A0PJX8 343 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 KRT37O76014 449 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 ENDOUP21128 410 aaKnown RBP5.3□□□□□ -1.56
PTCD3-216ENST00000487043 BCL6P41182 706 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 RAP1GAPP47736 663 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 MECP2P51608 486 aaKnown RBP5.3□□□□□ -1.56
PTCD3-216ENST00000487043 CLCN7P51798 805 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 RPL11P62913 178 aaKnown RBP5.3□□□□□ -1.56
PTCD3-216ENST00000487043 OCRLQ01968 901 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 EGR3Q06889 387 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 MESP2Q0VG99 397 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 PIN1Q13526 163 aaPredicted RBP5.3□□□□□ -1.56
PTCD3-216ENST00000487043 CRY1Q16526 586 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 ABCB5Q2M3G0 1257 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 C16orf59Q7L2K0 433 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 CHPFQ8IZ52 775 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 JAM3Q9BX67 310 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 SEMA3GQ9NS98 782 aa5.3□□□□□ -1.56
PTCD3-216ENST00000487043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTCD3-216ENST00000487043 NOB1Q9ULX3 412 aaKnown RBP5.3□□□□□ -1.56
PTCD3-216ENST00000487043 MAGI1Q96QZ7 1491 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-216ENST00000487043 WNT9AO14904 365 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 NPHS1O60500 1241 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 ULK1O75385 1050 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 FBXO21O94952 628 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 MYBL2P10244 700 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 KRT15P19012 456 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 TEKQ02763 1124 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 PTPN21Q16825 1174 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 CYP2R1Q6VVX0 501 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 TMPRSS7Q7RTY8 843 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 C14orf80Q86SX3 495 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 MYO1HQ8N1T3 1032 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 BHLHE22Q8NFJ8 381 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-216ENST00000487043 TOX2Q96NM4 488 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 ATP13A1Q9HD20 1204 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 VTA1Q9NP79 307 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 OXSMQ9NWU1 459 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 ERVK13-1Q9NX77 482 aa5.29□□□□□ -1.56
PTCD3-216ENST00000487043 SNAPC4Q5SXM2 1469 aa5.28□□□□□ -1.56
PTCD3-216ENST00000487043 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-216ENST00000487043 E2F8A0AVK6 867 aa5.28□□□□□ -1.56
PTCD3-216ENST00000487043 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
PTCD3-216ENST00000487043 KCNK3O14649 394 aa5.28□□□□□ -1.56
PTCD3-216ENST00000487043 PEX14O75381 377 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms