RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 KCNH1O95259 989 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 NFATC3Q12968 1075 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 PPP2R5EQ16537 467 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 NLRP10Q86W26 655 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 MKL1Q969V6 931 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 GNRHR2Q96P88 292 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 LGR4Q9BXB1 951 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 RBPJLQ9UBG7 517 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 AKT3Q9Y243 479 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 SUGT1Q9Y2Z0 365 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 SLC12A7Q9Y666 1083 aa5.34□□□□□ -1.55
SNRNP27-204ENST00000487029 FOXS1O43638 330 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 COL6A1P12109 1028 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 BMS1Q14692 1282 aaKnown RBP5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 NFE2L2Q16236 605 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 FXNQ16595 210 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 MIIPQ5JXC2 388 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 TEPPQ6URK8 271 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 CEP68Q76N32 757 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 NOP9Q86U38 636 aaKnown RBP5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 RIOX2Q8IUF8 465 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 KLHL36Q8N4N3 616 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 FRS2Q8WU20 508 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 CHFRQ96EP1 664 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 ZNF503Q96F45 646 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 CLIC6Q96NY7 704 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 SEMA4AQ9H3S1 761 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 PHAXQ9H814 394 aaKnown RBP5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 FBXL7Q9UJT9 491 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 EMC9Q9Y3B6 208 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 X6R8D5 127 aa5.33□□□□□ -1.56
SNRNP27-204ENST00000487029 PLSCR1O15162 318 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 CNOT4O95628 575 aaKnown RBP5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 LRG1P02750 347 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 DDR2Q16832 855 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 PHF19Q5T6S3 580 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 MROH9Q5TGP6 573 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 LARP1BQ659C4 914 aaKnown RBP5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 ZNF575Q86XF7 245 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 CCDC103Q8IW40 242 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 Q8N1Y9 231 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 CELF2-AS1Q8N7Q2 184 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 NPLOC4Q8TAT6 608 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 TOE1Q96GM8 510 aaKnown RBP5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 YIPF4Q9BSR8 244 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 IKZF4Q9H2S9 585 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 PIF1Q9H611 641 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 NGRNQ9NPE2 291 aaKnown RBP5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 DTLQ9NZJ0 730 aa5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 TMEFF2Q9UIK5 374 aaPredicted RBP5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 CDK11AQ9UQ88 783 aaPredicted RBP5.32□□□□□ -1.56
SNRNP27-204ENST00000487029 TCRBV5S2A0A599 114 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 BCL6P41182 706 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 DGCR2P98153 550 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 SMN1Q16637 294 aaKnown RBP5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 TCTN3Q6NUS6 607 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 TRMT10BQ6PF06 316 aaKnown RBP5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 TMC5Q6UXY8 1006 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 RNF207Q6ZRF8 634 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 LRP10Q7Z4F1 713 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 MRFAP1L1Q96HT8 127 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 SRPK1Q96SB4 655 aaKnown RBP5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 ST7Q9NRC1 585 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 FTSJ1Q9UET6 329 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 ADAM29Q9UKF5 820 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 MSRB2Q9Y3D2 182 aa5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 TIMM13Q9Y5L4 95 aaPredicted RBP5.31□□□□□ -1.56
SNRNP27-204ENST00000487029 RPL11P62913 178 aaKnown RBP5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 RASA3Q14644 834 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 GTF2IRD2BQ6EKJ0 949 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 GIMAP6Q6P9H5 292 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 GTF2IRD2Q86UP8 949 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 TRMT2BQ96GJ1 504 aaKnown RBP5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 DEPDC7Q96QD5 511 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 CCDC113Q9H0I3 377 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 BARX1Q9HBU1 254 aaPredicted RBP5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 SNTG2Q9NY99 539 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 ZNF652Q9Y2D9 606 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 PCSK5Q92824 1860 aa5.3□□□□□ -1.56
SNRNP27-204ENST00000487029 NARSO43776 548 aaKnown RBP5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 DDAH1O94760 285 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 KLHL18O94889 574 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 GJB6O95452 261 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 KIAA1211LQ6NV74 962 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 C6orf15Q6UXA7 325 aaPredicted RBP5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 FAM178BQ8IXR5 827 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 MICAL1Q8TDZ2 1067 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 EXTL1Q92935 676 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 ADOQ96SZ5 270 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 CYP26B1Q9NR63 512 aa5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 TMA7Q9Y2S6 64 aaKnown RBP5.29□□□□□ -1.56
SNRNP27-204ENST00000487029 ANKRD34BA5PLL1 514 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 CCDC85CA6NKD9 419 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 B2RBV5 119 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 HGSO14964 777 aaPredicted RBP5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 PDPK1O15530 556 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 TADA3O75528 432 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 ZNF202O95125 648 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms