RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 AMIGO3Q86WK7 504 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 SHISA4Q96DD7 197 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 CLIC6Q96NY7 704 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 TFCP2L1Q9NZI6 479 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 NRBP1Q9UHY1 535 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 PAXBP1Q9Y5B6 917 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 PCDHB6Q9Y5E3 794 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 LTBP1Q14766 1721 aa8.03□□□□□ -1.12
SMARCAL1-212ENST00000486983 KAT6BQ8WYB5 2073 aa8.02□□□□□ -1.12
SMARCAL1-212ENST00000486983 UBR3Q6ZT12 1888 aa8.02□□□□□ -1.12
SMARCAL1-212ENST00000486983 CYP2D7A0A087X1C5 515 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 KLRG2A4D1S0 409 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 USP17L3A6NCW0 530 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 USP17L4A6NCW7 530 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 TSPY2A6NKD2 308 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 M0R2N6 131 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 NPHP1O15259 732 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 SMC2O95347 1197 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 ERCC5P28715 1186 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 GRNP28799 593 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 HOXA10P31260 410 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 ATP1A2P50993 1020 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 ATP2C1P98194 919 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 FANCCQ00597 558 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 PNOCQ13519 176 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 MORC3Q14149 939 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 GRM4Q14833 912 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 SYCP1Q15431 976 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 PERM1Q5SV97 790 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 ARL6IP4Q66PJ3 421 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 RCSD1Q6JBY9 416 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 USP17L2Q6R6M4 530 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 FAM196AQ6ZSG2 479 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 USP17L1Q7RTZ2 530 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 C17orf53Q8N3J3 647 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 SRBD1Q8N5C6 995 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 DAGLBQ8NCG7 672 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 CCDC112Q8NEF3 446 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 ENOX1Q8TC92 643 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 TBC1D22AQ8WUA7 517 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 ERCC4Q92889 916 aaPredicted RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 CAMKK2Q96RR4 588 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 LZTS2Q9BRK4 669 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 XPO4Q9C0E2 1151 aaKnown RBP8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 HSD3B7Q9H2F3 369 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 PDCL3Q9H2J4 239 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 KAT14Q9H8E8 782 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 CABP5Q9NP86 173 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 PCDHA5Q9Y5H7 936 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 NAV1Q8NEY1 1877 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 GAKO14976 1311 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 EP400Q96L91 3159 aa8.02□□□□□ -1.13
SMARCAL1-212ENST00000486983 PLIN4Q96Q06 1357 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 TAF1P21675 1872 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 BIN1O00499 593 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 CCP110O43303 1012 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 CTIFO43310 598 aaKnown RBP8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 PAX4O43316 350 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 DEAF1O75398 565 aaPredicted RBP8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 PRDM1O75626 825 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 BBOX1O75936 387 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 SLFN14P0C7P3 912 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 SKILP12757 684 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 GYS1P13807 737 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 ZNF18P17022 549 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 SFPQP23246 707 aaKnown RBP eCLIP8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 SMARCA1P28370 1054 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 SSTR4P31391 388 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 USP5P45974 858 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 NOVP48745 357 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 HIF1AQ16665 826 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 TTC38Q5R3I4 469 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 IER5Q5VY09 327 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 IGF2-ASQ6U949 168 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 WFDC8Q8IUA0 241 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 CMTR1Q8N1G2 835 aaKnown RBP8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 CCDC148Q8NFR7 591 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 RPGRQ92834 1020 aaKnown RBP8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 SMARCE1Q969G3 411 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 RBM17Q96I25 401 aaKnown RBP8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 CRAMP1Q96RY5 1269 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 RTFDC1Q9BY42 306 aaPredicted RBP8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 CSRNP2Q9H175 543 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 MCM9Q9NXL9 1143 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 FRRS1LQ9P0K9 344 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 IFNKQ9P0W0 207 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 MAN1B1Q9UKM7 699 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 SUGT1Q9Y2Z0 365 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 FAM205AQ6ZU69 1335 aa8.01□□□□□ -1.13
SMARCAL1-212ENST00000486983 QSER1Q2KHR3 1735 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 A0A087WWV3 80 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 GPR75-ASB3A0A0A6YYF3 556 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 SMIM22K7EJ46 135 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 POLR2DO15514 142 aaKnown RBP8□□□□□ -1.13
SMARCAL1-212ENST00000486983 CYP2D6P10635 497 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 FSTP19883 344 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 BMP6P22004 513 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 PLCD1P51178 756 aa8□□□□□ -1.13
SMARCAL1-212ENST00000486983 GPSM2P81274 684 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms