RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 GSG1L2A8MUP6 293 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 UBE2Q2LH0YL09 131 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 ZPR1O75312 459 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 TNFRSF21O75509 655 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 GFPT2O94808 682 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 KIAA0754O94854 1291 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 EYA4O95677 639 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 HOXC9P31274 260 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 HOXD12P35452 270 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 PAPOLAP51003 745 aaKnown RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 AK2P54819 239 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 ADCY1Q08828 1119 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 SSRP1Q08945 709 aaKnown RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 PABPC4Q13310 644 aaKnown RBP eCLIP6.27□□□□□ -1.41
SF1-217ENST00000486960 PPP2R5BQ15173 497 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 C8orf34Q49A92 452 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 TMEM67Q5HYA8 995 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 INTS11Q5TA45 600 aaKnown RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 MFSD4BQ5TF39 518 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 TBC1D9BQ66K14 1250 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 CDCA2Q69YH5 1023 aaPredicted RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 BTN2A1Q7KYR7 527 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 SDCCAG8Q86SQ7 713 aaPredicted RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 TSEN2Q8NCE0 465 aaKnown RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 MSANTD4Q8NCY6 345 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 GIMAP1Q8WWP7 306 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 CDCA5Q96FF9 252 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 MASTLQ96GX5 879 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 CNTNAP3BQ96NU0 1288 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 CNTNAP3Q9BZ76 1288 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 UNC45AQ9H3U1 944 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 SCHIP1Q9P0W5 487 aaPredicted RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 STIM2Q9P246 746 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 DOLKQ9UPQ8 538 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 LRRFIP2Q9Y608 721 aaKnown RBP6.27□□□□□ -1.41
SF1-217ENST00000486960 COL15A1P39059 1388 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 FRYQ5TBA9 3013 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 GVINP1Q7Z2Y8 2422 aa6.27□□□□□ -1.41
SF1-217ENST00000486960 SPTBN2O15020 2390 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 CACNA1HO95180 2353 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 KIF7Q2M1P5 1343 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 FRMPD2Q68DX3 1309 aaPredicted RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 CENPJQ9HC77 1338 aaPredicted RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 hCG_1642624A0A1W2PR95 340 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 MED19A0JLT2 244 aaPredicted RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 SYNDIG1LA6NDD5 238 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 TSPY2A6NKD2 308 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 M0R2N6 131 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 PMM2O15305 246 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 TIPRLO75663 272 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 RFPL3O75679 317 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 MSL3P1P0C860 447 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 TSPY3P0CV98 308 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 TSPY8P0CW00 308 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 DESP17661 470 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 TATP17735 454 aaPredicted RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 IREB2P48200 963 aaKnown RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 TSPY1Q01534 308 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 G3BP1Q13283 466 aaKnown RBP eCLIP6.26□□□□□ -1.411e-6■□□□□ 9.7
SF1-217ENST00000486960 CRHR2Q13324 411 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 ACAP1Q15027 740 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 FXNQ16595 210 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 ARHGAP29Q52LW3 1261 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 OXLD1Q5BKU9 147 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 VARS2Q5ST30 1063 aaKnown RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 ARMC4Q5T2S8 1044 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 PCNX4Q63HM2 1172 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 XRRA1Q6P2D8 792 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 FASTKD5Q7L8L6 764 aaKnown RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 TPH2Q8IWU9 490 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 FAM26EQ8N5C1 309 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 TAF4BQ92750 862 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 HDAC2Q92769 488 aaKnown RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 BHMTQ93088 406 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 HIC2Q96JB3 615 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 PUS7LQ9H0K6 701 aaKnown RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 ANKEF1Q9NU02 776 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 HOXC10Q9NYD6 342 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 CGNQ9P2M7 1197 aaKnown RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 FAM8A1Q9UBU6 413 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 GTF3C4Q9UKN8 822 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 PCDHB9Q9Y5E1 797 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 PCDHGA10Q9Y5H3 936 aa6.26□□□□□ -1.41
SF1-217ENST00000486960 USP9XQ93008 2570 aaPredicted RBP6.26□□□□□ -1.41
SF1-217ENST00000486960 ANKRD18BA2A2Z9 1011 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
SF1-217ENST00000486960 ERC2O15083 957 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 TLR5O60602 858 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 COBLO75128 1261 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 SKAP2O75563 359 aaPredicted RBP6.25□□□□□ -1.41
SF1-217ENST00000486960 ECEL1O95672 775 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 BMP1P13497 986 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 IGFBP4P22692 258 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 ITGB8P26012 769 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 GALNSP34059 522 aa6.25□□□□□ -1.41
SF1-217ENST00000486960 EIF4A3P38919 411 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms