RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 FBXL5Q9UKA1 691 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 ATP8A1Q9Y2Q0 1164 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 PCNTO95613 3336 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 SFI1A8K8P3 1242 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 SNAP25P60880 206 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 MAGOHP61326 146 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 ADCY1Q08828 1119 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 KRT71Q3SY84 523 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 UBAP2Q5T6F2 1119 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 SPAG5Q96R06 1193 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 SELENOSQ9BQE4 189 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 SEC63Q9UGP8 760 aaKnown RBP13.61□□□□□ -0.23
HSPG2-211ENST00000486901 NR2E1Q9Y466 385 aa13.61□□□□□ -0.23
HSPG2-211ENST00000486901 LRP6O75581 1613 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 CCDC121Q6ZUS5 278 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 RETREG2Q8NC44 543 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.6□□□□□ -0.23
HSPG2-211ENST00000486901 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 NID2Q14112 1375 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 GRID2IPA4D2P6 1211 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 FOXO6A8MYZ6 492 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 TTI1O43156 1089 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 CDR1P51861 262 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 AMPD3Q01432 767 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 IFFO1Q0D2I5 559 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 ALS2CLQ60I27 953 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 SLIT2O94813 1529 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 GCOM1H8Y6P7 765 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-211ENST00000486901 DNM1LO00429 736 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 MYZAPP0CAP1 466 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 RCAN1P53805 252 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 PTK2Q05397 1052 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 RPS6KA1Q15418 735 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
HSPG2-211ENST00000486901 AADACL2Q6P093 401 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 CPLX4Q7Z7G2 160 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
HSPG2-211ENST00000486901 GIMAP7Q8NHV1 300 aa13.6□□□□□ -0.23
HSPG2-211ENST00000486901 CLIC2O15247 247 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 NOL4O94818 638 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 CENPPQ6IPU0 288 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 TAX1BP1Q86VP1 789 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 SLC40A1Q9NP59 571 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 KRIT1O00522 736 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 CPP00450 1065 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 FNTAP49354 379 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 UAP1Q16222 522 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-211ENST00000486901 MGARPQ8TDB4 240 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 KLC4Q9NSK0 619 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 BAIAP2L1Q9UHR4 511 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 CHD4Q14839 1912 aa13.59□□□□□ -0.23
HSPG2-211ENST00000486901 PHRF1Q9P1Y6 1649 aaKnown RBP13.59□□□□□ -0.23
HSPG2-211ENST00000486901 SART1O43290 800 aaKnown RBP13.58□□□□□ -0.23
HSPG2-211ENST00000486901 DDB1Q16531 1140 aa13.58□□□□□ -0.23
HSPG2-211ENST00000486901 LRRC55Q6ZSA7 311 aa13.58□□□□□ -0.23
HSPG2-211ENST00000486901 CCDC84Q86UT8 332 aaPredicted RBP13.58□□□□□ -0.23
HSPG2-211ENST00000486901 ZSCAN29Q8IWY8 852 aaPredicted RBP13.58□□□□□ -0.23
HSPG2-211ENST00000486901 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.23
HSPG2-211ENST00000486901 C7orf25Q9BPX7 421 aa13.58□□□□□ -0.23
HSPG2-211ENST00000486901 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.23
HSPG2-211ENST00000486901 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 SIK1P57059 783 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 TTBK2Q6IQ55 1244 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-211ENST00000486901 MYOCDQ8IZQ8 938 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-211ENST00000486901 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 EYA3Q99504 573 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 PANK4Q9NVE7 773 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 BCL9LQ86UU0 1499 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 POTECB2RU33 542 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 ERVV-1B6SEH8 477 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 FAM133BQ5BKY9 247 aaKnown RBP13.58□□□□□ -0.24
HSPG2-211ENST00000486901 KRT79Q5XKE5 535 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 SUGP1Q8IWZ8 645 aaKnown RBP13.58□□□□□ -0.24
HSPG2-211ENST00000486901 GLG1Q92896 1179 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 TSG101Q99816 390 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 CD2APQ9Y5K6 639 aa13.58□□□□□ -0.24
HSPG2-211ENST00000486901 COL5A2P05997 1499 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-211ENST00000486901 G3V3G9 751 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 M0R2N6 131 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 ORC4O43929 436 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 CASP5P51878 434 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 CYP4A11Q02928 519 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 COASYQ13057 564 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 ITGB3BPQ13352 177 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-211ENST00000486901 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 DAAM2Q86T65 1068 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 PRPF38AQ8NAV1 312 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms