RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 KIAA0753Q2KHM9 967 aa18.24■□□□□ 0.51
HDAC8-218ENST00000486704 CYFIP1Q7L576 1253 aa18.24■□□□□ 0.51
HDAC8-218ENST00000486704 FAM177A1Q8N128 213 aaPredicted RBP18.24■□□□□ 0.51
HDAC8-218ENST00000486704 REXO1Q8N1G1 1221 aaKnown RBP18.24■□□□□ 0.51
HDAC8-218ENST00000486704 CRYGNQ8WXF5 182 aa18.24■□□□□ 0.51
HDAC8-218ENST00000486704 GPR20Q99678 358 aa18.24■□□□□ 0.51
HDAC8-218ENST00000486704 BCAS3Q9H6U6 928 aa18.24■□□□□ 0.51
HDAC8-218ENST00000486704 SH3GLB2Q9NR46 395 aa18.24■□□□□ 0.51
HDAC8-218ENST00000486704 CYP2C9P11712 490 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 GDF6Q6KF10 455 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-218ENST00000486704 PSRC1Q6PGN9 363 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-218ENST00000486704 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
HDAC8-218ENST00000486704 NIPA1Q7RTP0 329 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 C7orf31Q8N865 590 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 BICD2Q8TD16 824 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 PGBD1Q96JS3 809 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 RNPC3Q96LT9 517 aaKnown RBP18.23■□□□□ 0.51
HDAC8-218ENST00000486704 CTAGE1Q96RT6 745 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 MXRA8Q9BRK3 442 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 IL23AQ9NPF7 189 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 TMEM260Q9NX78 707 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 WDR81Q562E7 1941 aa18.23■□□□□ 0.51
HDAC8-218ENST00000486704 GBF1Q92538 1859 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 ATP9AO75110 1047 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 DEXIO95424 95 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 SEC24BO95487 1268 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 SSRP1Q08945 709 aaKnown RBP18.22■□□□□ 0.51
HDAC8-218ENST00000486704 RBL2Q08999 1139 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 PTGISQ16647 500 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 CEP55Q53EZ4 464 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 CCDC155Q8N6L0 562 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.51
HDAC8-218ENST00000486704 LARP6Q9BRS8 491 aaKnown RBP18.22■□□□□ 0.51
HDAC8-218ENST00000486704 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 NOD1Q9Y239 953 aa18.22■□□□□ 0.51
HDAC8-218ENST00000486704 H3BRB1 525 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 PFKFB2O60825 505 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 CDKL5O76039 1030 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 PFKMP08237 780 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 CYP3A4P08684 503 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 HOXC8P31273 242 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 AK2P54819 239 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 SCRN1Q12765 414 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 STK3Q13188 491 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 BFSP2Q13515 415 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 C8orf34Q49A92 452 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 TMEM240Q5SV17 173 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 JAKMIP3Q5VZ66 844 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 C16orf59Q7L2K0 433 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 CAGE1Q8TC20 777 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 ALG1Q9BT22 464 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
HDAC8-218ENST00000486704 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
HDAC8-218ENST00000486704 KCNH7Q9NS40 1196 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 VPS54Q9P1Q0 977 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 TPCN1Q9ULQ1 816 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 NFASCO94856 1347 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 STK36Q9NRP7 1315 aa18.21■□□□□ 0.51
HDAC8-218ENST00000486704 MEIS1O00470 390 aa18.2■□□□□ 0.5
HDAC8-218ENST00000486704 ADAMTS3O15072 1205 aa18.2■□□□□ 0.5
HDAC8-218ENST00000486704 PPFIA3O75145 1194 aa18.2■□□□□ 0.5
HDAC8-218ENST00000486704 RFC2P35250 354 aa18.2■□□□□ 0.5
HDAC8-218ENST00000486704 CCL23P55773 120 aa18.2■□□□□ 0.5
HDAC8-218ENST00000486704 SMAD3P84022 425 aaKnown RBP18.2■□□□□ 0.5
HDAC8-218ENST00000486704 ZNF215Q9UL58 517 aaPredicted RBP18.2■□□□□ 0.5
HDAC8-218ENST00000486704 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
HDAC8-218ENST00000486704 TCF7P36402 384 aaPredicted RBP18.19■□□□□ 0.5
HDAC8-218ENST00000486704 PTK7Q13308 1070 aa18.19■□□□□ 0.5
HDAC8-218ENST00000486704 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
HDAC8-218ENST00000486704 CYP2W1Q8TAV3 490 aa18.19■□□□□ 0.5
HDAC8-218ENST00000486704 AFAP1L1Q8TED9 768 aa18.19■□□□□ 0.5
HDAC8-218ENST00000486704 DHX38Q92620 1227 aaKnown RBP18.19■□□□□ 0.5
HDAC8-218ENST00000486704 JPH1Q9HDC5 661 aaPredicted RBP18.19■□□□□ 0.5
HDAC8-218ENST00000486704 TELO2Q9Y4R8 837 aa18.19■□□□□ 0.5
HDAC8-218ENST00000486704 EMSYQ7Z589 1322 aa18.19■□□□□ 0.5
HDAC8-218ENST00000486704 MYH9P35579 1960 aaKnown RBP18.19■□□□□ 0.5
HDAC8-218ENST00000486704 IGLV3-22A0A075B6J6 115 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 SETQ01105 290 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-218ENST00000486704 SP4Q02446 784 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 FAM109BQ6ICB4 259 aaPredicted RBP18.18■□□□□ 0.5
HDAC8-218ENST00000486704 GALNT17Q6IS24 598 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 ZNF365Q70YC5 407 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 TRIM50Q86XT4 487 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 RETREG2Q8NC44 543 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 DAGLBQ8NCG7 672 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 SEPT1Q8WYJ6 367 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 HERVK_113Q902F9 699 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 VWCEQ96DN2 955 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 SCLYQ96I15 445 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 AGO4Q9HCK5 861 aaKnown RBP18.18■□□□□ 0.5
HDAC8-218ENST00000486704 SLC9A2Q9UBY0 812 aa18.18■□□□□ 0.5
HDAC8-218ENST00000486704 SIP14410 1827 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 GSTTP1A0A1W2PQM5 241 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 FAM86B1E9PN63 330 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 PARNO95453 639 aaKnown RBP18.17■□□□□ 0.5
HDAC8-218ENST00000486704 FAM86B2P0C5J1 330 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms