RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PUM1Q14671 1186 aaKnown RBP eCLIP9.86□□□□□ -0.83
XRN1-212ENST00000486211 PPP2R5BQ15173 497 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 SLFNL1Q499Z3 407 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 PLEKHG4Q58EX7 1191 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 CTR9Q6PD62 1173 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 GMCL1P1Q8NEA9 526 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 MKL1Q969V6 931 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 RPGRIP1Q96KN7 1286 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 C11orf84Q9BUA3 381 aaPredicted RBP9.86□□□□□ -0.83
XRN1-212ENST00000486211 DLL3Q9NYJ7 618 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 CLIP2Q9UDT6 1046 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 CHD6Q8TD26 2715 aa9.86□□□□□ -0.83
XRN1-212ENST00000486211 LOC102724159A0A0B4J2E5 919 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 E9PSI1 815 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 ARIH2O95376 493 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 MMP1P03956 469 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 BMP3P12645 472 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 BMPR1AP36894 532 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 PTK7Q13308 1070 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 PWP2Q15269 919 aaKnown RBP9.85□□□□□ -0.83
XRN1-212ENST00000486211 NSMFQ6X4W1 530 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 ADGRD2Q7Z7M1 963 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 EFHBQ8N7U6 833 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 SSH3Q8TE77 659 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 SUSD6Q92537 303 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 OSBPL7Q9BZF2 842 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 MRS2Q9HD23 443 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 HDAC6Q9UBN7 1215 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 SYNPO2Q9UMS6 1093 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 PCDHB3Q9Y5E6 796 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 PCDHGC5Q9Y5F6 944 aa9.85□□□□□ -0.83
XRN1-212ENST00000486211 EMSYQ7Z589 1322 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 CHD8Q9HCK8 2581 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 TMEM232C9JQI7 657 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 UPP2O95045 317 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 MMP3P08254 477 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 ATF7P17544 494 aaPredicted RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 EDNRBP24530 442 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 SNAP25P60880 206 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 OS9Q13438 667 aaPredicted RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 BAATQ14032 418 aaPredicted RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 HIC1Q14526 733 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 TTF1Q15361 905 aaPredicted RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 SCFD2Q8WU76 684 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 AFG1LQ8WV93 481 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 CLP1Q92989 425 aaKnown RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 RC3H2Q9HBD1 1191 aaKnown RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 ADD3Q9UEY8 706 aaKnown RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 BARX2Q9UMQ3 279 aaPredicted RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 NOP58Q9Y2X3 529 aaKnown RBP9.84□□□□□ -0.83
XRN1-212ENST00000486211 CEP250Q9BV73 2442 aa9.84□□□□□ -0.83
XRN1-212ENST00000486211 MAP1BP46821 2468 aaKnown RBP9.83□□□□□ -0.84
XRN1-212ENST00000486211 SURF6O75683 361 aaKnown RBP9.83□□□□□ -0.84
XRN1-212ENST00000486211 CSPG5O95196 566 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 CHGBP05060 677 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 TXNP10599 105 aaKnown RBP9.83□□□□□ -0.84
XRN1-212ENST00000486211 DNAJB1P25685 340 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 STAT2P52630 851 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 ZNF200P98182 395 aaPredicted RBP9.83□□□□□ -0.84
XRN1-212ENST00000486211 SLFN5Q08AF3 891 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 SLFN13Q68D06 897 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 CCDC62Q6P9F0 684 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 FAM160B2Q86V87 743 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 AMOTL1Q8IY63 956 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 KIAA2013Q8IYS2 634 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 FIBCD1Q8N539 461 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 STAG1Q8WVM7 1258 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 IL17RAQ96F46 866 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 CEP95Q96GE4 821 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 IFIH1Q9BYX4 1025 aaKnown RBP9.83□□□□□ -0.84
XRN1-212ENST00000486211 MTMR4Q9NYA4 1195 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 WDR87Q6ZQQ6 2873 aa9.83□□□□□ -0.84
XRN1-212ENST00000486211 USP24Q9UPU5 2620 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 HAS3O00219 553 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 NFIBO00712 420 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 PLA2G6O60733 806 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 BRD1O95696 1058 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 ARP10275 920 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 ADD2P35612 726 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 ARHGAP1Q07960 439 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 COL9A2Q14055 689 aaPredicted RBP9.82□□□□□ -0.84
XRN1-212ENST00000486211 ST3GAL2Q16842 350 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 SLC30A10Q6XR72 485 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 KREMEN2Q8NCW0 462 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 CHURC1Q8WUH1 139 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 PLAGL2Q9UPG8 496 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 RWDD3Q9Y3V2 267 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 ATRXP46100 2492 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 PKD1L2Q7Z442 2459 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 ADGRA3Q8IWK6 1321 aa9.82□□□□□ -0.84
XRN1-212ENST00000486211 RSPH10B2B2RC85 870 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 GOLIM4O00461 696 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 BCAR3O75815 825 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 TTLL1O95922 423 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 ICAM1P05362 532 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 RSPH10BP0C881 870 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 NRIP1P48552 1158 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 RBM10P98175 930 aaKnown RBP9.81□□□□□ -0.84
XRN1-212ENST00000486211 ATP8B2P98198 1209 aa9.81□□□□□ -0.84
XRN1-212ENST00000486211 PDE4BQ07343 736 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms