RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 HDAC7Q8WUI4 952 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 OSBPL9Q96SU4 736 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 PLEKHA4Q9H4M7 779 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 ATF5Q9Y2D1 282 aaPredicted RBP19.37■□□□□ 0.69
TNXB-205ENST00000486148 ARFGEF1Q9Y6D6 1849 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 ADAMTSL1Q8N6G6 1762 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L15C9J2P7 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L13C9JLJ4 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L11C9JVI0 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L18D6R9N7 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L22D6RA61 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L17D6RBQ6 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L19D6RCP7 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L20D6RJB6 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 NCK2O43639 380 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 RNF40O75150 1001 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 NOL4O94818 638 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 SLC1A4P43007 532 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L24Q0WX57 530 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 CCDC40Q4G0X9 1142 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 USP17L6PQ6QN14 398 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 NELFCDQ8IXH7 590 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 PPM1EQ8WY54 764 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 RIN2Q8WYP3 895 aaPredicted RBP19.37■□□□□ 0.69
TNXB-205ENST00000486148 MTMR8Q96EF0 704 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 SELENOOQ9BVL4 669 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 FAM204AQ9H8W3 233 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 KANSL2Q9H9L4 492 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 EHD2Q9NZN4 543 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 SWAP70Q9UH65 585 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 KIAA1024Q9UPX6 916 aa19.37■□□□□ 0.69
TNXB-205ENST00000486148 MRPS25P82663 173 aaKnown RBP19.36■□□□□ 0.69
TNXB-205ENST00000486148 APBA1Q02410 837 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 RASSF7Q02833 373 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 HYIQ5T013 277 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 IQCEQ6IPM2 695 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 FOXR2Q6PJQ5 311 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 MMGT1Q8N4V1 131 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 PCDHA2Q9Y5H9 948 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
TNXB-205ENST00000486148 PJA2O43164 708 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 TLR2O60603 784 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 PRLRP16471 622 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 GPATCH4Q5T3I0 446 aaKnown RBP19.36■□□□□ 0.69
TNXB-205ENST00000486148 ZNF572Q7Z3I7 529 aaPredicted RBP19.36■□□□□ 0.69
TNXB-205ENST00000486148 LRRC1Q9BTT6 524 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 COA1Q9GZY4 146 aa19.36■□□□□ 0.69
TNXB-205ENST00000486148 MYH4Q9Y623 1939 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 POTEB3A0JP26 581 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 POTECB2RU33 542 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 SEPT2Q15019 361 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 CDC42EP5Q6NZY7 148 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 POTEBQ6S5H4 581 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 SPATA4Q8NEY3 305 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 ALS2CR12Q96Q35 445 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 EDEM3Q9BZQ6 932 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 DMGDHQ9UI17 866 aaKnown RBP19.35■□□□□ 0.69
TNXB-205ENST00000486148 LRRC37AA6NMS7 1700 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 POLRMTO00411 1230 aaKnown RBP19.35■□□□□ 0.69
TNXB-205ENST00000486148 BUB1O43683 1085 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 PRPF6O94906 941 aaKnown RBP19.35■□□□□ 0.69
TNXB-205ENST00000486148 PLA2G4BP0C869 781 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 GCFC2P16383 781 aaKnown RBP19.35■□□□□ 0.69
TNXB-205ENST00000486148 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
TNXB-205ENST00000486148 MATR3P43243 847 aaKnown RBP eCLIP19.35■□□□□ 0.69
TNXB-205ENST00000486148 NFIAQ12857 509 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 SHROOM1Q2M3G4 852 aaPredicted RBP19.35■□□□□ 0.69
TNXB-205ENST00000486148 TDRD12Q587J7 1177 aaKnown RBP19.35■□□□□ 0.69
TNXB-205ENST00000486148 TMC4Q7Z404 712 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 SP8Q8IXZ3 490 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 CRACR2AQ9BSW2 395 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 HYOU1Q9Y4L1 999 aa19.35■□□□□ 0.69
TNXB-205ENST00000486148 SSU72P8A0A1W2PR75 194 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 DOK7Q18PE1 504 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 FAM83BQ5T0W9 1011 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 ZFPM1Q8IX07 1006 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 LSM14BQ9BX40 385 aaKnown RBP19.34■□□□□ 0.69
TNXB-205ENST00000486148 NT5C3AQ9H0P0 336 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 CEP72Q9P209 647 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 MYO3BQ8WXR4 1341 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 RAD21O60216 631 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 STAT3P40763 770 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 GPBP1Q86WP2 473 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 SUGP1Q8IWZ8 645 aaKnown RBP19.34■□□□□ 0.69
TNXB-205ENST00000486148 AENQ8WTP8 325 aaKnown RBP19.34■□□□□ 0.69
TNXB-205ENST00000486148 TLR10Q9BXR5 811 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 BMP2KQ9NSY1 1161 aaPredicted RBP19.34■□□□□ 0.69
TNXB-205ENST00000486148 SUGT1Q9Y2Z0 365 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 KDM3AQ9Y4C1 1321 aa19.34■□□□□ 0.69
TNXB-205ENST00000486148 GREB1LQ9C091 1923 aaPredicted RBP19.33■□□□□ 0.69
TNXB-205ENST00000486148 AGPSO00116 658 aa19.33■□□□□ 0.69
TNXB-205ENST00000486148 GGCXP38435 758 aa19.33■□□□□ 0.69
TNXB-205ENST00000486148 ITIH3Q06033 890 aa19.33■□□□□ 0.69
TNXB-205ENST00000486148 QRICH1Q2TAL8 776 aa19.33■□□□□ 0.69
TNXB-205ENST00000486148 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.33■□□□□ 0.69
TNXB-205ENST00000486148 SCFD1Q8WVM8 642 aa19.33■□□□□ 0.69
TNXB-205ENST00000486148 C10orf71Q711Q0 1435 aa19.33■□□□□ 0.69
TNXB-205ENST00000486148 KLRG2A4D1S0 409 aaPredicted RBP19.33■□□□□ 0.68
TNXB-205ENST00000486148 CPP00450 1065 aa19.33■□□□□ 0.68
TNXB-205ENST00000486148 TCP1P17987 556 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms