RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 HDAC6Q9UBN7 1215 aa22.4■■□□□ 1.18
SNX5-213ENST00000486039 ATP9AO75110 1047 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 IFNAR1P17181 557 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 PTGISQ16647 500 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 RASIP1Q5U651 963 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 PSRC1Q6PGN9 363 aaPredicted RBP22.39■■□□□ 1.17
SNX5-213ENST00000486039 ZNF365Q70YC5 407 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 VWCEQ96DN2 955 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 SCLYQ96I15 445 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 PDRG1Q9NUG6 133 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 GTF2IRD1Q9UHL9 959 aa22.39■■□□□ 1.17
SNX5-213ENST00000486039 ADAMTS3O15072 1205 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 FOSP01100 380 aaPredicted RBP22.38■■□□□ 1.17
SNX5-213ENST00000486039 KCNA2P16389 499 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 DNAJB2P25686 324 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 ZNF274Q96GC6 653 aaPredicted RBP22.38■■□□□ 1.17
SNX5-213ENST00000486039 GPR20Q99678 358 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 RNF26Q9BY78 433 aaPredicted RBP22.38■■□□□ 1.17
SNX5-213ENST00000486039 ANO3Q9BYT9 981 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 GLT8D2Q9H1C3 349 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 EHMT1Q9H9B1 1298 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 JADE2Q9NQC1 790 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 A0A0C4DFX4 3053 aa22.38■■□□□ 1.17
SNX5-213ENST00000486039 NOP56O00567 594 aaKnown RBP22.37■■□□□ 1.17
SNX5-213ENST00000486039 LGALS2P05162 132 aa22.37■■□□□ 1.17
SNX5-213ENST00000486039 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.37■■□□□ 1.17
SNX5-213ENST00000486039 C7orf31Q8N865 590 aa22.37■■□□□ 1.17
SNX5-213ENST00000486039 CYP2W1Q8TAV3 490 aa22.37■■□□□ 1.17
SNX5-213ENST00000486039 CDHR1Q96JP9 859 aa22.37■■□□□ 1.17
SNX5-213ENST00000486039 SLC26A6Q9BXS9 759 aa22.37■■□□□ 1.17
SNX5-213ENST00000486039 ZMYND12Q9H0C1 365 aa22.37■■□□□ 1.17
SNX5-213ENST00000486039 NOD1Q9Y239 953 aa22.37■■□□□ 1.17
SNX5-213ENST00000486039 ESYT2A0FGR8 921 aa22.36■■□□□ 1.17
SNX5-213ENST00000486039 ANAPC15P60006 121 aa22.36■■□□□ 1.17
SNX5-213ENST00000486039 AKAP17AQ02040 695 aaKnown RBP22.36■■□□□ 1.17
SNX5-213ENST00000486039 AP3B2Q13367 1082 aa22.36■■□□□ 1.17
SNX5-213ENST00000486039 MTMR1Q13613 665 aa22.36■■□□□ 1.17
SNX5-213ENST00000486039 HIC1Q14526 733 aa22.36■■□□□ 1.17
SNX5-213ENST00000486039 MAFAQ8NHW3 353 aaPredicted RBP22.36■■□□□ 1.17
SNX5-213ENST00000486039 MXRA8Q9BRK3 442 aa22.36■■□□□ 1.17
SNX5-213ENST00000486039 H3BRB1 525 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 PITPNM1O00562 1244 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 MAFGO15525 162 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 SEC24BO95487 1268 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 FOSL2P15408 326 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 ZNF200P98182 395 aaPredicted RBP22.35■■□□□ 1.17
SNX5-213ENST00000486039 SP4Q02446 784 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 JAKMIP3Q5VZ66 844 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 GIMAP8Q8ND71 665 aaPredicted RBP22.35■■□□□ 1.17
SNX5-213ENST00000486039 HERVK_113Q902F9 699 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 DHX38Q92620 1227 aaKnown RBP22.35■■□□□ 1.17
SNX5-213ENST00000486039 TUT1Q9H6E5 874 aaKnown RBP22.35■■□□□ 1.17
SNX5-213ENST00000486039 PKD2L1Q9P0L9 805 aa22.35■■□□□ 1.17
SNX5-213ENST00000486039 GRXCR1A8MXD5 290 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 FGBP02675 491 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 IQCF3P0C7M6 154 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 SREBF1P36956 1147 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 STK3Q13188 491 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 BFSP2Q13515 415 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 GRIN2CQ14957 1233 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 CCDC12Q8WUD4 166 aaPredicted RBP22.34■■□□□ 1.17
SNX5-213ENST00000486039 TIFAQ96CG3 184 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 IL17RAQ96F46 866 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 C6orf50Q9HD87 102 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 KCNH7Q9NS40 1196 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 DOCK5Q9H7D0 1870 aa22.34■■□□□ 1.17
SNX5-213ENST00000486039 UTP14CQ5TAP6 766 aaKnown RBP22.33■■□□□ 1.17
SNX5-213ENST00000486039 TRIM50Q86XT4 487 aa22.33■■□□□ 1.17
SNX5-213ENST00000486039 RPUSD2Q8IZ73 545 aaKnown RBP22.33■■□□□ 1.17
SNX5-213ENST00000486039 RETREG2Q8NC44 543 aa22.33■■□□□ 1.17
SNX5-213ENST00000486039 PBX4Q9BYU1 374 aa22.33■■□□□ 1.17
SNX5-213ENST00000486039 MTIF3Q9H2K0 278 aaKnown RBP22.33■■□□□ 1.17
SNX5-213ENST00000486039 ZNF576Q9H609 170 aa22.33■■□□□ 1.17
SNX5-213ENST00000486039 CXXC1Q9P0U4 656 aaPredicted RBP22.33■■□□□ 1.17
SNX5-213ENST00000486039 VPS54Q9P1Q0 977 aa22.33■■□□□ 1.17
SNX5-213ENST00000486039 ARP10275 920 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 GNA11P29992 359 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 PBX2P40425 430 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 ARHGAP4P98171 946 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 SSRP1Q08945 709 aaKnown RBP22.32■■□□□ 1.16
SNX5-213ENST00000486039 CEP55Q53EZ4 464 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 OTOP2Q7RTS6 562 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 DEFB128Q7Z7B8 93 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 CAGE1Q8TC20 777 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 CRYGNQ8WXF5 182 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 WNT8BQ93098 351 aa22.32■■□□□ 1.16
SNX5-213ENST00000486039 GSTTP1A0A1W2PQM5 241 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 MEIS1O00470 390 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 CPLX1O14810 134 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 SMIM10L2AP0DMW4 78 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 SMIM10L2BP0DMW5 78 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 HOXC8P31273 242 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 TCF7P36402 384 aaPredicted RBP22.31■■□□□ 1.16
SNX5-213ENST00000486039 RBL2Q08999 1139 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 SCRN1Q12765 414 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 PTK7Q13308 1070 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 REXO1Q8N1G1 1221 aaKnown RBP22.31■■□□□ 1.16
SNX5-213ENST00000486039 SEPT1Q8WYJ6 367 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 RNPEPQ9H4A4 650 aa22.31■■□□□ 1.16
SNX5-213ENST00000486039 TPCN1Q9ULQ1 816 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms