RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PPP1R18Q6NYC8 613 aa20.2■□□□□ 0.82
COL6A1-204ENST00000486023 CCDC155Q8N6L0 562 aa20.2■□□□□ 0.82
COL6A1-204ENST00000486023 GPRASP2Q96D09 838 aa20.2■□□□□ 0.82
COL6A1-204ENST00000486023 GPR20Q99678 358 aa20.2■□□□□ 0.82
COL6A1-204ENST00000486023 C16orf70Q9BSU1 422 aa20.2■□□□□ 0.82
COL6A1-204ENST00000486023 ANO3Q9BYT9 981 aa20.2■□□□□ 0.82
COL6A1-204ENST00000486023 TUT1Q9H6E5 874 aaKnown RBP20.2■□□□□ 0.82
COL6A1-204ENST00000486023 PDRG1Q9NUG6 133 aa20.2■□□□□ 0.82
COL6A1-204ENST00000486023 KIAA1217Q5T5P2 1943 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 hCG_1984214I3L0E3 225 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 HAS3O00219 553 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 PRPF3O43395 683 aaKnown RBP20.19■□□□□ 0.82
COL6A1-204ENST00000486023 EPB41L2O43491 1005 aaKnown RBP20.19■□□□□ 0.82
COL6A1-204ENST00000486023 FOSP01100 380 aaPredicted RBP20.19■□□□□ 0.82
COL6A1-204ENST00000486023 SESTD1Q86VW0 696 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 TRIM50Q86XT4 487 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 ZNF713Q8N859 430 aaPredicted RBP20.19■□□□□ 0.82
COL6A1-204ENST00000486023 CYP2W1Q8TAV3 490 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 CDHR1Q96JP9 859 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 UIMC1Q96RL1 719 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 AGXT2Q9BYV1 514 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 MTIF3Q9H2K0 278 aaKnown RBP20.19■□□□□ 0.82
COL6A1-204ENST00000486023 SEMA6BQ9H3T3 888 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 JADE2Q9NQC1 790 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 UBIAD1Q9Y5Z9 338 aa20.19■□□□□ 0.82
COL6A1-204ENST00000486023 HOXD8P13378 290 aaPredicted RBP20.18■□□□□ 0.82
COL6A1-204ENST00000486023 PBX2P40425 430 aa20.18■□□□□ 0.82
COL6A1-204ENST00000486023 HIC1Q14526 733 aa20.18■□□□□ 0.82
COL6A1-204ENST00000486023 FBXL16Q8N461 479 aa20.18■□□□□ 0.82
COL6A1-204ENST00000486023 GIMAP8Q8ND71 665 aaPredicted RBP20.18■□□□□ 0.82
COL6A1-204ENST00000486023 HERVK_113Q902F9 699 aa20.18■□□□□ 0.82
COL6A1-204ENST00000486023 SENP7Q9BQF6 1050 aa20.18■□□□□ 0.82
COL6A1-204ENST00000486023 C6orf50Q9HD87 102 aa20.18■□□□□ 0.82
COL6A1-204ENST00000486023 SLC4A7Q9Y6M7 1214 aa20.18■□□□□ 0.82
COL6A1-204ENST00000486023 C17orf102A2RUQ5 167 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 PITPNM1O00562 1244 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 CPLX1O14810 134 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 SMIM10L2AP0DMW4 78 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 SMIM10L2BP0DMW5 78 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 KCNA2P16389 499 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 TCF7P36402 384 aaPredicted RBP20.17■□□□□ 0.82
COL6A1-204ENST00000486023 PKN1Q16512 942 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 DHX38Q92620 1227 aaKnown RBP20.17■□□□□ 0.82
COL6A1-204ENST00000486023 ATP6V0A1Q93050 837 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 MXRA8Q9BRK3 442 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 GLT8D2Q9H1C3 349 aa20.17■□□□□ 0.82
COL6A1-204ENST00000486023 SCN10AQ9Y5Y9 1956 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 ADAMTS3O15072 1205 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 ARP10275 920 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 ACTN1P12814 892 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 DNAJB2P25686 324 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 MARK3P27448 753 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 SSRP1Q08945 709 aaKnown RBP20.16■□□□□ 0.82
COL6A1-204ENST00000486023 CAGE1Q8TC20 777 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 CCDC12Q8WUD4 166 aaPredicted RBP20.16■□□□□ 0.82
COL6A1-204ENST00000486023 SEPT1Q8WYJ6 367 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 TIFAQ96CG3 184 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 GUCD1Q96NT3 240 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 CTAGE1Q96RT6 745 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 TM6SF1Q9BZW5 370 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 TTYH1Q9H313 450 aaPredicted RBP20.16■□□□□ 0.82
COL6A1-204ENST00000486023 RNPEPQ9H4A4 650 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 KCNH7Q9NS40 1196 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 SETD4Q9NVD3 440 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
COL6A1-204ENST00000486023 ZNF215Q9UL58 517 aaPredicted RBP20.16■□□□□ 0.82
COL6A1-204ENST00000486023 CKBP12277 381 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 SELPP16109 830 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 RFC2P35250 354 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 THPOP40225 353 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 RABGGTBP53611 331 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 PTK7Q13308 1070 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 AP3B2Q13367 1082 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 NTRK3Q16288 839 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 RASIP1Q5U651 963 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 LRRC8DQ7L1W4 858 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 RASGRP4Q8TDF6 673 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 AFAP1L1Q8TED9 768 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 GLG1Q92896 1179 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 WNT8BQ93098 351 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 VWCEQ96DN2 955 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 CDX2Q99626 313 aaPredicted RBP20.15■□□□□ 0.82
COL6A1-204ENST00000486023 PBX4Q9BYU1 374 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 MSRAQ9UJ68 235 aa20.15■□□□□ 0.82
COL6A1-204ENST00000486023 MYH7BA7E2Y1 1941 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 GSTTP1A0A1W2PQM5 241 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 DDX39AO00148 427 aaKnown RBP20.14■□□□□ 0.81
COL6A1-204ENST00000486023 MAFGO15525 162 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 TREHO43280 583 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 DTNBO60941 627 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 IFNAR1P17181 557 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 NLRP5P59047 1200 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 ARHGAP4P98171 946 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 CEP55Q53EZ4 464 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 ZNF618Q5T7W0 954 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 TRIM22Q8IYM9 498 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 SDF4Q9BRK5 362 aa20.14■□□□□ 0.81
COL6A1-204ENST00000486023 RNF26Q9BY78 433 aaPredicted RBP20.14■□□□□ 0.81
COL6A1-204ENST00000486023 PFKMP08237 780 aa20.13■□□□□ 0.81
COL6A1-204ENST00000486023 GNA11P29992 359 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms