RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ATP9AO75110 1047 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 ACRP10323 421 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 KCNA2P16389 499 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 SSRP1Q08945 709 aaKnown RBP21.05■□□□□ 0.96
COL1A1-206ENST00000485870 PTGISQ16647 500 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 SESTD1Q86VW0 696 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 TRIM22Q8IYM9 498 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 GPR20Q99678 358 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL1A1-206ENST00000485870 ZMYND12Q9H0C1 365 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 WNT8AQ9H1J5 351 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 JADE2Q9NQC1 790 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 VPS54Q9P1Q0 977 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 HDAC6Q9UBN7 1215 aa21.05■□□□□ 0.96
COL1A1-206ENST00000485870 LGALS2P05162 132 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 CPLX2Q6PUV4 134 aaKnown RBP21.04■□□□□ 0.96
COL1A1-206ENST00000485870 C16orf59Q7L2K0 433 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 GIMAP8Q8ND71 665 aaPredicted RBP21.04■□□□□ 0.96
COL1A1-206ENST00000485870 CCDC148Q8NFR7 591 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 SCLYQ96I15 445 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 MXRA8Q9BRK3 442 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 C16orf70Q9BSU1 422 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 GTF2IRD1Q9UHL9 959 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 TPCN1Q9ULQ1 816 aa21.04■□□□□ 0.96
COL1A1-206ENST00000485870 GNA11P29992 359 aa21.03■□□□□ 0.96
COL1A1-206ENST00000485870 SREBF1P36956 1147 aa21.03■□□□□ 0.96
COL1A1-206ENST00000485870 AK2P54819 239 aa21.03■□□□□ 0.96
COL1A1-206ENST00000485870 UTP14CQ5TAP6 766 aaKnown RBP21.03■□□□□ 0.96
COL1A1-206ENST00000485870 REXO1Q8N1G1 1221 aaKnown RBP21.03■□□□□ 0.96
COL1A1-206ENST00000485870 CYP2W1Q8TAV3 490 aa21.03■□□□□ 0.96
COL1A1-206ENST00000485870 SLKQ9H2G2 1235 aaPredicted RBP21.03■□□□□ 0.96
COL1A1-206ENST00000485870 IL23AQ9NPF7 189 aa21.03■□□□□ 0.96
COL1A1-206ENST00000485870 H3BRB1 525 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 ZNF76P36508 570 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 ARHGAP4P98171 946 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 SCRN1Q12765 414 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 TMEM240Q5SV17 173 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 ZNF365Q70YC5 407 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 TRIM50Q86XT4 487 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 RASGRP4Q8TDF6 673 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 IL17RAQ96F46 866 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 CTAGE1Q96RT6 745 aa21.02■□□□□ 0.96
COL1A1-206ENST00000485870 TUT1Q9H6E5 874 aaKnown RBP21.02■□□□□ 0.96
COL1A1-206ENST00000485870 TRIP12Q14669 1992 aaPredicted RBP21.01■□□□□ 0.95
COL1A1-206ENST00000485870 MAFGO15525 162 aa21.01■□□□□ 0.95
COL1A1-206ENST00000485870 BFSP2Q13515 415 aa21.01■□□□□ 0.95
COL1A1-206ENST00000485870 ANKRD1Q15327 319 aa21.01■□□□□ 0.95
COL1A1-206ENST00000485870 CEP55Q53EZ4 464 aa21.01■□□□□ 0.95
COL1A1-206ENST00000485870 PSRC1Q6PGN9 363 aaPredicted RBP21.01■□□□□ 0.95
COL1A1-206ENST00000485870 RETREG2Q8NC44 543 aa21.01■□□□□ 0.95
COL1A1-206ENST00000485870 BICD2Q8TD16 824 aa21.01■□□□□ 0.95
COL1A1-206ENST00000485870 KCNH7Q9NS40 1196 aa21.01■□□□□ 0.95
COL1A1-206ENST00000485870 SCN5AQ14524 2016 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 PFKFB2O60825 505 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 DEXIO95424 95 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 ARP10275 920 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 TCF7P36402 384 aaPredicted RBP21■□□□□ 0.95
COL1A1-206ENST00000485870 NLRP5P59047 1200 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 ZNF200P98182 395 aaPredicted RBP21■□□□□ 0.95
COL1A1-206ENST00000485870 C8orf34Q49A92 452 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 MCTP2Q6DN12 878 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 DHX38Q92620 1227 aaKnown RBP21■□□□□ 0.95
COL1A1-206ENST00000485870 AIFM3Q96NN9 605 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 SH3GLB2Q9NR46 395 aa21■□□□□ 0.95
COL1A1-206ENST00000485870 TANC1Q9C0D5 1861 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 PITPNM1O00562 1244 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 DTNBO60941 627 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 CDKL5O76039 1030 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 NEK4P51957 841 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 HIC1Q14526 733 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 GPR153Q6NV75 609 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 Q7L0L9 218 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 DEFB128Q7Z7B8 93 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 CCDC155Q8N6L0 562 aa20.99■□□□□ 0.95
COL1A1-206ENST00000485870 JPH1Q9HDC5 661 aaPredicted RBP20.99■□□□□ 0.95
COL1A1-206ENST00000485870 ZNF215Q9UL58 517 aaPredicted RBP20.99■□□□□ 0.95
COL1A1-206ENST00000485870 GSTTP1A0A1W2PQM5 241 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 C17orf102A2RUQ5 167 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 FAM86B1E9PN63 330 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 MEIS1O00470 390 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 FGBP02675 491 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 FAM86B2P0C5J1 330 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 SMIM10L2AP0DMW4 78 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 SMIM10L2BP0DMW5 78 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 OTOP2Q7RTS6 562 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 RPUSD2Q8IZ73 545 aaKnown RBP20.98■□□□□ 0.95
COL1A1-206ENST00000485870 DEFB123Q8N688 67 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 CAGE1Q8TC20 777 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 SEPT1Q8WYJ6 367 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 SDF4Q9BRK5 362 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 AGO4Q9HCK5 861 aaKnown RBP20.98■□□□□ 0.95
COL1A1-206ENST00000485870 SLC9A2Q9UBY0 812 aa20.98■□□□□ 0.95
COL1A1-206ENST00000485870 LARGE1O95461 756 aa20.97■□□□□ 0.95
COL1A1-206ENST00000485870 CYP3A4P08684 503 aa20.97■□□□□ 0.95
COL1A1-206ENST00000485870 IQCF3P0C7M6 154 aa20.97■□□□□ 0.95
COL1A1-206ENST00000485870 SMAD3P84022 425 aaKnown RBP20.97■□□□□ 0.95
COL1A1-206ENST00000485870 PTK7Q13308 1070 aa20.97■□□□□ 0.95
COL1A1-206ENST00000485870 ITGB3BPQ13352 177 aaPredicted RBP20.97■□□□□ 0.95
COL1A1-206ENST00000485870 NIPA1Q7RTP0 329 aa20.97■□□□□ 0.95
COL1A1-206ENST00000485870 PLA2G4DQ86XP0 818 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms