RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 DCDC2CA8MYV0 355 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 NOP56O00567 594 aaKnown RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 DYNC1LI2O43237 492 aaPredicted RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 PRODHO43272 600 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 PPM1BO75688 479 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 EPHX1P07099 455 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 C6orf222P0C671 652 aaPredicted RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 CCDC159P0C7I6 412 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 NAT1P18440 290 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 PSMA3P25788 255 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 KIF5BP33176 963 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 IGFALSP35858 605 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 CAP2P40123 477 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 EIF5P55010 431 aaKnown RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 SH3BGRP55822 239 aaPredicted RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 ETF1P62495 437 aaKnown RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 ITKQ08881 620 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 FAPQ12884 760 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 BNIP3Q12983 259 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 STRN3Q13033 797 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 DDX10Q13206 875 aaKnown RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 PICALMQ13492 652 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 E2F5Q15329 346 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 AOC3Q16853 763 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 GFOD2Q3B7J2 385 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 FBLN7Q53RD9 439 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 WDR45BQ5MNZ6 344 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 FAM83BQ5T0W9 1011 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 MAATS1Q7Z4T9 603 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 ARHGEF25Q86VW2 580 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 PPFIBP1Q86W92 1011 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 SNX32Q86XE0 403 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 HID1Q8IV36 788 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 BRSK2Q8IWQ3 736 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 KCT2Q8NC54 265 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 SLC7A14Q8TBB6 771 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 ZNF507Q8TCN5 953 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 ASB11Q8WXH4 323 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 WDR89Q96FK6 387 aaPredicted RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 CDK5RAP3Q96JB5 506 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 TMEM87BQ96K49 555 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 PPP1R16BQ96T49 567 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 TTC1Q99614 292 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 HERPUD2Q9BSE4 406 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 MENTQ9BUN1 341 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 MTFR1LQ9H019 292 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 IFT22Q9H7X7 185 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 C9orf78Q9NZ63 289 aaPredicted RBP5.26□□□□□ -1.57
RTN4-213ENST00000485749 WHRNQ9P202 907 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 TJP2Q9UDY2 1190 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 GTF2IRD1Q9UHL9 959 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 PPP1R9AQ9ULJ8 1098 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 PCDHGC5Q9Y5F6 944 aa5.26□□□□□ -1.57
RTN4-213ENST00000485749 WASHC2AQ641Q2 1341 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 CARMIL2Q6F5E8 1435 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 PRAMEF27A3QJZ7 478 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 PRSS47A8MTI9 375 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 SMTNL1A8MU46 457 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 K7ESF4 209 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 OPA1O60313 960 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 CLEC3AO75596 197 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 RNASE1P07998 156 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 BPIP17213 487 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 RPL17P18621 184 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 POLR2BP30876 1174 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 CD151P48509 253 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 NEK4P51957 841 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 ZNF132P52740 706 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 SNX16P57768 344 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 IFT88Q13099 833 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 CDK5R2Q13319 367 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 SMC1AQ14683 1233 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 PCBP1Q15365 356 aaKnown RBP eCLIP5.25□□□□□ -1.57
RTN4-213ENST00000485749 DNAJC21Q5F1R6 531 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 CXorf57Q6NSI4 855 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 ERAP2Q6P179 960 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 PKN3Q6P5Z2 889 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 CFAP161Q6P656 301 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 UBE2R2Q712K3 238 aaPredicted RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 OTUD6AQ7L8S5 288 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 ZBTB46Q86UZ6 589 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 C11orf74Q86VG3 221 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 RASSF3Q86WH2 238 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 C12orf40Q86WS4 652 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 TTC30AQ86WT1 665 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 PHACTR4Q8IZ21 702 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 ARL10Q8N8L6 244 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 PTPRN2Q92932 1015 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 ATP6V1E2Q96A05 226 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 CENPTQ96BT3 561 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 PGBD4Q96DM1 585 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 VMP1Q96GC9 406 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 MRGPRX3Q96LB0 322 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 TOX2Q96NM4 488 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 XPO4Q9C0E2 1151 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 AASDHPPTQ9NRN7 309 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 RABL2BQ9UNT1 228 aa5.25□□□□□ -1.57
RTN4-213ENST00000485749 APOBEC2Q9Y235 224 aaKnown RBP5.25□□□□□ -1.57
RTN4-213ENST00000485749 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms