RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 BCAS3Q9H6U6 928 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 ATP11BQ9Y2G3 1177 aa20.25■□□□□ 0.83
SREBF1-213ENST00000485080 CYP3A7-CYP3A51PA0A087WV96 503 aa20.24■□□□□ 0.83
SREBF1-213ENST00000485080 CD2BP2O95400 341 aaKnown RBP20.24■□□□□ 0.83
SREBF1-213ENST00000485080 F2P00734 622 aa20.24■□□□□ 0.83
SREBF1-213ENST00000485080 CYP3A7P24462 503 aa20.24■□□□□ 0.83
SREBF1-213ENST00000485080 ZNF76P36508 570 aa20.24■□□□□ 0.83
SREBF1-213ENST00000485080 SETQ01105 290 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-213ENST00000485080 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-213ENST00000485080 MOXD1Q6UVY6 613 aa20.24■□□□□ 0.83
SREBF1-213ENST00000485080 KAT2BQ92831 832 aa20.24■□□□□ 0.83
SREBF1-213ENST00000485080 GPR20Q99678 358 aa20.24■□□□□ 0.83
SREBF1-213ENST00000485080 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
SREBF1-213ENST00000485080 DCDC2CA8MYV0 355 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 HAS3O00219 553 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 CD4P01730 458 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 ARP10275 920 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 SESTD1Q86VW0 696 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 FAM126BQ8IXS8 530 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 TBCKQ8TEA7 893 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 LENG9Q96B70 501 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 MBOAT7Q96N66 472 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 KATNAL1Q9BW62 490 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 PDLIM7Q9NR12 457 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 GJB4Q9NTQ9 266 aa20.23■□□□□ 0.83
SREBF1-213ENST00000485080 NOP56O00567 594 aaKnown RBP20.22■□□□□ 0.83
SREBF1-213ENST00000485080 KIAA0355O15063 1070 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 PQBP1O60828 265 aaKnown RBP20.22■□□□□ 0.83
SREBF1-213ENST00000485080 DTNBO60941 627 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 MMP1P03956 469 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 CLTBP09497 229 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 FAAP100Q0VG06 881 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 NONOQ15233 471 aaKnown RBP eCLIP20.22■□□□□ 0.83
SREBF1-213ENST00000485080 NBPF20Q3BBV1 942 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 PLA2G4DQ86XP0 818 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 TNFRSF25Q93038 417 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 C16orf70Q9BSU1 422 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 BRMS1Q9HCU9 246 aa20.22■□□□□ 0.83
SREBF1-213ENST00000485080 KRT2P35908 639 aa20.21■□□□□ 0.83
SREBF1-213ENST00000485080 PSMC6P62333 389 aa20.21■□□□□ 0.83
SREBF1-213ENST00000485080 ITGB3BPQ13352 177 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-213ENST00000485080 TRIM29Q14134 588 aa20.21■□□□□ 0.83
SREBF1-213ENST00000485080 Q4G0T1 1027 aa20.21■□□□□ 0.83
SREBF1-213ENST00000485080 KRT40Q6A162 431 aa20.21■□□□□ 0.83
SREBF1-213ENST00000485080 SDF4Q9BRK5 362 aa20.21■□□□□ 0.83
SREBF1-213ENST00000485080 JPH1Q9HDC5 661 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-213ENST00000485080 TBX21Q9UL17 535 aa20.21■□□□□ 0.83
SREBF1-213ENST00000485080 CCDC194A0A1B0GVG4 234 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 TLR3O15455 904 aaKnown RBP20.2■□□□□ 0.82
SREBF1-213ENST00000485080 DHX15O43143 795 aaKnown RBP20.2■□□□□ 0.82
SREBF1-213ENST00000485080 FBXO18Q8NFZ0 1043 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 OXER1Q8TDS5 423 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 SEPT1Q8WYJ6 367 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 TBC1D22BQ9NU19 505 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 PRKAG2Q9UGJ0 569 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 ZMYND8Q9ULU4 1186 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-213ENST00000485080 TRIOBPQ9H2D6 2365 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 DOCK5Q9H7D0 1870 aa20.2■□□□□ 0.82
SREBF1-213ENST00000485080 IPO5O00410 1097 aaKnown RBP20.19■□□□□ 0.82
SREBF1-213ENST00000485080 LGALS2P05162 132 aa20.19■□□□□ 0.82
SREBF1-213ENST00000485080 PSEN2P49810 448 aa20.19■□□□□ 0.82
SREBF1-213ENST00000485080 PPP4R3AQ6IN85 833 aa20.19■□□□□ 0.82
SREBF1-213ENST00000485080 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
SREBF1-213ENST00000485080 PRO3102Q9H379 93 aa20.19■□□□□ 0.82
SREBF1-213ENST00000485080 SLC9A2Q9UBY0 812 aa20.19■□□□□ 0.82
SREBF1-213ENST00000485080 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
SREBF1-213ENST00000485080 GSTTP1A0A1W2PQM5 241 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 TRIM43BA6NCK2 446 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 H3BRB1 525 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 SORBS3O60504 671 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 ATG7O95352 703 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 SUPT20HL2P0C7V6 817 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 ZNF286BP0CG31 522 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 GCFC2P16383 781 aaKnown RBP20.18■□□□□ 0.82
SREBF1-213ENST00000485080 MFSD10Q14728 455 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 KIAA0753Q2KHM9 967 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 PRR16Q569H4 304 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 NEK8Q86SG6 692 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 DIS3L2Q8IYB7 885 aaKnown RBP20.18■□□□□ 0.82
SREBF1-213ENST00000485080 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 TRIM43Q96BQ3 446 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-213ENST00000485080 NAP1L4Q99733 375 aaKnown RBP20.18■□□□□ 0.82
SREBF1-213ENST00000485080 GDF15Q99988 308 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 ZNF577Q9BSK1 485 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 TUT1Q9H6E5 874 aaKnown RBP20.18■□□□□ 0.82
SREBF1-213ENST00000485080 TMEM39AQ9NV64 488 aa20.18■□□□□ 0.82
SREBF1-213ENST00000485080 LAMA3Q16787 3333 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 B4GALT4O60513 344 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 LGR5O75473 907 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 HOXC8P31273 242 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 BMP8BP34820 402 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 NR5A1Q13285 461 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 CUL4AQ13619 759 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 SAFBQ15424 915 aaKnown RBP eCLIP20.17■□□□□ 0.82
SREBF1-213ENST00000485080 INF2Q27J81 1249 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 SH3RF1Q7Z6J0 888 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 RIT2Q99578 217 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 TELO2Q9Y4R8 837 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 EMSYQ7Z589 1322 aa20.17■□□□□ 0.82
SREBF1-213ENST00000485080 BTBD18B2RXH4 712 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms