RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 ZSWIM3Q96MP5 696 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 ZFYVE21Q9BQ24 234 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 TANGO6Q9C0B7 1094 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 FBXL7Q9UJT9 491 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 ZDHHC9Q9Y397 364 aa6.48□□□□□ -1.37
SMC4-215ENST00000484799 FAM47E-STBD1D6RA91 191 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 SLC27A2O14975 620 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 GRK2P25098 689 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 GRK3P35626 688 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 GRIN1Q05586 938 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 NAALADL2Q58DX5 795 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 EMC4Q5J8M3 183 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 VASNQ6EMK4 673 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 TRMT10BQ6PF06 316 aaKnown RBP6.47□□□□□ -1.37
SMC4-215ENST00000484799 PLEKHH3Q7Z736 793 aa6.47□□□□□ -1.37
SMC4-215ENST00000484799 CNOT11Q9UKZ1 510 aaKnown RBP6.47□□□□□ -1.37
SMC4-215ENST00000484799 COL6A2P12110 1019 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 GPR85P60893 370 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 MTERF2Q49AM1 385 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 KCNT2Q6UVM3 1135 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 TMC5Q6UXY8 1006 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 LBX2Q6XYB7 198 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 SCUBE1Q8IWY4 988 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 C1orf159Q96HA4 380 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 LOXL4Q96JB6 756 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 SPATA9Q9BWV2 254 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 BARX1Q9HBU1 254 aaPredicted RBP6.46□□□□□ -1.38
SMC4-215ENST00000484799 ASH2LQ9UBL3 628 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 INVSQ9Y283 1065 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 DUSP10Q9Y6W6 482 aa6.46□□□□□ -1.38
SMC4-215ENST00000484799 PDPK1O15530 556 aa6.45□□□□□ -1.38
SMC4-215ENST00000484799 GTF2F1P35269 517 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMC4-215ENST00000484799 OTOP3Q7RTS5 596 aa6.45□□□□□ -1.38
SMC4-215ENST00000484799 MTDHQ86UE4 582 aaKnown RBP6.45□□□□□ -1.38
SMC4-215ENST00000484799 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMC4-215ENST00000484799 DSEQ9UL01 958 aa6.45□□□□□ -1.38
SMC4-215ENST00000484799 BLACEA4D250 179 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 C9orf118A6NHY6 69 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 AQP7O14520 342 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 MSCO60682 206 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 PLATP00750 562 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 LRG1P02750 347 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 SOD2P04179 222 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 ENO2P09104 434 aaPredicted RBP6.44□□□□□ -1.38
SMC4-215ENST00000484799 NAT1P18440 290 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 ST5P78524 1137 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
SMC4-215ENST00000484799 HIRIP3Q9BW71 556 aaPredicted RBP6.44□□□□□ -1.38
SMC4-215ENST00000484799 SMPD4Q9NXE4 827 aa6.44□□□□□ -1.38
SMC4-215ENST00000484799 NPEPPSL1A6NEC2 478 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 GSTA4O15217 222 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 SSRP1Q08945 709 aaKnown RBP6.43□□□□□ -1.38
SMC4-215ENST00000484799 ADAM9Q13443 819 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 TUSC3Q13454 348 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 ZXDCQ2QGD7 858 aaPredicted RBP6.43□□□□□ -1.38
SMC4-215ENST00000484799 ARHGEF18Q6ZSZ5 1173 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 ARHGEF4Q9NR80 690 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 CATSPERZQ9NTU4 200 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 PPARGC1AQ9UBK2 798 aaKnown RBP6.43□□□□□ -1.38
SMC4-215ENST00000484799 PFDN2Q9UHV9 154 aa6.43□□□□□ -1.38
SMC4-215ENST00000484799 B4GALT4O60513 344 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 ITGB3P05106 788 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 CKMP06732 381 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 PAK1Q13153 545 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 PAN2Q504Q3 1202 aaKnown RBP6.42□□□□□ -1.38
SMC4-215ENST00000484799 STYK1Q6J9G0 422 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.42□□□□□ -1.38
SMC4-215ENST00000484799 RBM12BQ8IXT5 1001 aaKnown RBP6.42□□□□□ -1.38
SMC4-215ENST00000484799 NLGN4XQ8N0W4 816 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 WDR48Q8TAF3 677 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 CLEC4DQ8WXI8 215 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 OSBP2Q969R2 916 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 CCDC113Q9H0I3 377 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 SIRPGQ9P1W8 387 aa6.42□□□□□ -1.38
SMC4-215ENST00000484799 TRBV23-1A0A0A0MS06 115 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 LAMTOR5O43504 91 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 CAPNS1P04632 268 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 INSRRP14616 1297 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 FAHP16930 419 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 MAGEA10P43363 369 aaPredicted RBP6.41□□□□□ -1.38
SMC4-215ENST00000484799 GLRBP48167 497 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 MLLT6P55198 1093 aaPredicted RBP6.41□□□□□ -1.38
SMC4-215ENST00000484799 SUMO1P63165 101 aaKnown RBP6.41□□□□□ -1.38
SMC4-215ENST00000484799 TBC1D10BQ4KMP7 808 aaPredicted RBP6.41□□□□□ -1.38
SMC4-215ENST00000484799 YOD1Q5VVQ6 348 aaPredicted RBP6.41□□□□□ -1.38
SMC4-215ENST00000484799 NBPF6Q5VWK0 638 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 HHIPL2Q6UWX4 724 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 TTLL11Q8NHH1 800 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 NBPF4Q96M43 638 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 DLL4Q9NR61 685 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 ARHGAP20Q9P2F6 1191 aa6.41□□□□□ -1.38
SMC4-215ENST00000484799 ZNF28P17035 718 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 GUCY1A3Q02108 690 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 EFEMP1Q12805 493 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 PRR31Q5SQ13 230 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 MAMDC2Q7Z304 686 aaPredicted RBP6.4□□□□□ -1.38
SMC4-215ENST00000484799 KBTBD2Q8IY47 623 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 KLHL36Q8N4N3 616 aa6.4□□□□□ -1.38
SMC4-215ENST00000484799 UHMK1Q8TAS1 419 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms