RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SLC5A4Q9NY91 659 aa23■■□□□ 1.27
VCPKMT-203ENST00000484763 SERTAD1Q9UHV2 236 aa23■■□□□ 1.27
VCPKMT-203ENST00000484763 DHX15O43143 795 aaKnown RBP22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 ICAM3P32942 547 aa22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 STAT6P42226 847 aa22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 ZRSR1Q15695 479 aaKnown RBP22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 RRAGBQ5VZM2 374 aa22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 CEP57L1Q8IYX8 460 aa22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 CCDC34Q96HJ3 373 aa22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 CDK5RAP3Q96JB5 506 aa22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 KDM3AQ9Y4C1 1321 aa22.99■■□□□ 1.27
VCPKMT-203ENST00000484763 SYCE3A1L190 88 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 SPATA31C2B4DYI2 1134 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 SLFN14P0C7P3 912 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 MORN1Q5T089 497 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 KANK3Q6NY19 840 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 B3GNT9Q6UX72 402 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 ELOA2Q8IYF1 753 aaPredicted RBP22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 CFHR5Q9BXR6 569 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 CHMP2AO43633 222 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 ATP9AO75110 1047 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 RBM43Q6ZSC3 357 aaKnown RBP22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 SEPT14Q6ZU15 432 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 UNC45AQ9H3U1 944 aa22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 HOOK1Q9UJC3 728 aaKnown RBP22.98■■□□□ 1.27
VCPKMT-203ENST00000484763 NFASCO94856 1347 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 DDX39AO00148 427 aaKnown RBP22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 TNPO2O14787 897 aaKnown RBP22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 KCNA2P16389 499 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 PLCG1P19174 1290 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 CCT6AP40227 531 aaKnown RBP22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 MAP2K5Q13163 448 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 ARMCX2Q7L311 632 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 NUDT12Q9BQG2 462 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 NT5C3AQ9H0P0 336 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 CUEDC2Q9H467 287 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 TCEAL9Q9UHQ7 104 aa22.97■■□□□ 1.27
VCPKMT-203ENST00000484763 EML1O00423 815 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 ECM2O94769 699 aaPredicted RBP22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 GRB10Q13322 594 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 HYIQ5T013 277 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 PDXDC2PQ6P474 469 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 SOCS4Q8WXH5 440 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 MAML3Q96JK9 1138 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 DOCK5Q9H7D0 1870 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 KRT76Q01546 638 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 TMEM119Q4V9L6 283 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 NAALADL2Q58DX5 795 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 MAMDC4Q6UXC1 1216 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 EEPD1Q7L9B9 569 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 CKAP2LQ8IYA6 745 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 PNMA5Q96PV4 448 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 PLIN2Q99541 437 aa22.96■■□□□ 1.27
VCPKMT-203ENST00000484763 RPA1P27694 616 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 FCGRTP55899 365 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 ZNF445P59923 1031 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 KCNV1Q6PIU1 500 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 SENP7Q9BQF6 1050 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 POLR3CQ9BUI4 534 aaPredicted RBP22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 MAGEF1Q9HAY2 307 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 RNF186Q9NXI6 227 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 STK17AQ9UEE5 414 aa22.95■■□□□ 1.26
VCPKMT-203ENST00000484763 MED24O75448 989 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 TBC1D8O95759 1140 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 HOXC6P09630 235 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 TGFB3P10600 412 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 LACTBP83111 547 aaPredicted RBP22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 EPHA7Q15375 998 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 MIER3Q7Z3K6 550 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 FBXO16Q8IX29 292 aaPredicted RBP22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 MSL3Q8N5Y2 521 aaKnown RBP22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 NPLOC4Q8TAT6 608 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 USP6NLQ92738 828 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 EIF2AK1Q9BQI3 630 aaKnown RBP22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 ZSWIM8A7E2V4 1837 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 SYNGAP1Q96PV0 1343 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 TRPA1O75762 1119 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 RGS2P41220 211 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 POSTNQ15063 836 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 NEK9Q8TD19 979 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 PAGE5Q96GU1 130 aa22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 JPH1Q9HDC5 661 aaPredicted RBP22.94■■□□□ 1.26
VCPKMT-203ENST00000484763 POTEB3A0JP26 581 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 SFNP31947 248 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 JAK3P52333 1124 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 ZNF746Q6NUN9 644 aaPredicted RBP22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 POTEBQ6S5H4 581 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 SH3RF1Q7Z6J0 888 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 CATSPER3Q86XQ3 398 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 GIMAP8Q8ND71 665 aaPredicted RBP22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 LRRC15Q8TF66 581 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 TINF2Q9BSI4 451 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 TUFT1Q9NNX1 390 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 VTA1Q9NP79 307 aa22.93■■□□□ 1.26
VCPKMT-203ENST00000484763 WDR64B1ANS9 1081 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 FOXN1O15353 648 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 SPATA31C1P0DKV0 1188 aa22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 UBA1P22314 1058 aaKnown RBP22.92■■□□□ 1.26
VCPKMT-203ENST00000484763 CTGFP29279 349 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms