RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 RRP12Q5JTH9 1297 aaKnown RBP7.21□□□□□ -1.26
PTCD3-215ENST00000484203 RIPOR1Q6ZS17 1223 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 ZNF589Q86UQ0 364 aaPredicted RBP7.21□□□□□ -1.26
PTCD3-215ENST00000484203 C7orf61Q8IZ16 206 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 PCSK9Q8NBP7 692 aaKnown RBP7.21□□□□□ -1.26
PTCD3-215ENST00000484203 ANKS1AQ92625 1134 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 UBAC1Q9BSL1 405 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 PRO3102Q9H379 93 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 KAT14Q9H8E8 782 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 IL17RBQ9NRM6 502 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 RNF146Q9NTX7 359 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 CCPG1Q9ULG6 757 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 ZMIZ1Q9ULJ6 1067 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 SIPA1L1O43166 1804 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 PHIPQ8WWQ0 1821 aa7.21□□□□□ -1.26
PTCD3-215ENST00000484203 DDX60LQ5H9U9 1706 aaKnown RBP7.21□□□□□ -1.26
PTCD3-215ENST00000484203 RBBP6Q7Z6E9 1792 aaKnown RBP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 FOCADQ5VW36 1801 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 A0A1B0GTH6 734 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 ZEB2O60315 1214 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 CABYRO75952 493 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 ZNF865P0CJ78 1059 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 CST5P28325 142 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 FXR1P51114 621 aaKnown RBP eCLIP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 ACVR2BQ13705 512 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 SART3Q15020 963 aaKnown RBP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 LRRC41Q15345 812 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 ASPRV1Q53RT3 343 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 TTC22Q5TAA0 569 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 SYDE2Q5VT97 1194 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 KCTD1Q719H9 257 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 RGS22Q8NE09 1264 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 TRPV1Q8NER1 839 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 STK32AQ8WU08 396 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 SCG3Q8WXD2 468 aaKnown RBP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 GDF15Q99988 308 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 TMEM47Q9BQJ4 181 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 RANBP17Q9H2T7 1088 aaKnown RBP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 GPAMQ9HCL2 828 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 HOMER2Q9NSB8 354 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 ZHX1Q9UKY1 873 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-215ENST00000484203 PRR12Q9ULL5 1215 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 ZNF232Q9UNY5 417 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 PHF24Q9UPV7 400 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 Q9Y3F1 56 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 RIPK3Q9Y572 518 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 PTPRFP10586 1907 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 ELP1O95163 1332 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 MROH7Q68CQ1 1323 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 WDR19Q8NEZ3 1342 aa7.2□□□□□ -1.26
PTCD3-215ENST00000484203 MYH1P12882 1939 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 ERICH2A1L162 156 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 CDC14CA4D256 554 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 NMT2O60551 498 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 F11P03951 625 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 SNHG28P0DPA3 235 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 PDHBP11177 359 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 ALAS1P13196 640 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 NOS2P35228 1153 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 ADCYAP1R1P41586 468 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 PSMA6P60900 246 aaKnown RBP7.19□□□□□ -1.26
PTCD3-215ENST00000484203 HAND2P61296 217 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 NKX3-2P78367 333 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 ZNF543Q08ER8 600 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 SNX17Q15036 470 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 LRRC26Q2I0M4 334 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 LRIT3Q3SXY7 679 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 BRDTQ58F21 947 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-215ENST00000484203 GJC2Q5T442 439 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-215ENST00000484203 IQSEC1Q6DN90 963 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 CCDC174Q6PII3 467 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 SLC39A5Q6ZMH5 540 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 KIAA1211Q6ZU35 1233 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 ARMCX2Q7L311 632 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 MCF2L2Q86YR7 1114 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 TDHQ8IZJ6 230 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 ZNF295-AS1Q8N0V1 137 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 FAM133AQ8N9E0 248 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 DNERQ8NFT8 737 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 GLT1D1Q96MS3 346 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 TOX2Q96NM4 488 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 UBE2OQ9C0C9 1292 aaKnown RBP7.19□□□□□ -1.26
PTCD3-215ENST00000484203 VTA1Q9NP79 307 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 A1CFQ9NQ94 594 aaKnown RBP7.19□□□□□ -1.26
PTCD3-215ENST00000484203 CYP39A1Q9NYL5 469 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 TACC3Q9Y6A5 838 aa7.19□□□□□ -1.26
PTCD3-215ENST00000484203 NAV1Q8NEY1 1877 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 SERTM1A2A2V5 107 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 SNAI1O95863 264 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-215ENST00000484203 MSX1P28360 303 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 MAGEA10P43363 369 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-215ENST00000484203 GJA9P57773 515 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 RTP1P59025 263 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 TEAD4Q15561 434 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 CCDC144BQ3MJ40 725 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 PRAMEF19Q5SWL8 479 aa7.18□□□□□ -1.26
PTCD3-215ENST00000484203 IFIT1BQ5T764 474 aaKnown RBP7.18□□□□□ -1.26
PTCD3-215ENST00000484203 TMEM164Q5U3C3 297 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms