RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 STAG2Q8N3U4 1231 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 ANKS1AQ92625 1134 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 SUSD3Q96L08 255 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 TMEM47Q9BQJ4 181 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 SRRDQ9UH36 339 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
COL8A1-207ENST00000483969 HCN4Q9Y3Q4 1203 aa10.44□□□□□ -0.74
COL8A1-207ENST00000483969 SLC27A2O14975 620 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 PLA2G6O60733 806 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 ZKSCAN1P17029 563 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-207ENST00000483969 MCCP23508 829 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 COL9A3Q14050 684 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-207ENST00000483969 SART3Q15020 963 aaKnown RBP10.43□□□□□ -0.74
COL8A1-207ENST00000483969 CREB3L3Q68CJ9 461 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 RAB44Q7Z6P3 723 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-207ENST00000483969 NBPF11Q86T75 865 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 FAM160B2Q86V87 743 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 TSEN2Q8NCE0 465 aaKnown RBP10.43□□□□□ -0.74
COL8A1-207ENST00000483969 DCAF4Q8WV16 495 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 NUP88Q99567 741 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-207ENST00000483969 SLF1Q9BQI6 1058 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 ZKSCAN3Q9BRR0 538 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 ARHGAP39Q9C0H5 1083 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 KAT14Q9H8E8 782 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 TXNRD2Q9NNW7 524 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 ADAMTS5Q9UNA0 930 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 OTOFQ9HC10 1997 aa10.43□□□□□ -0.74
COL8A1-207ENST00000483969 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 FOCADQ5VW36 1801 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 DDX60LQ5H9U9 1706 aaKnown RBP10.42□□□□□ -0.74
COL8A1-207ENST00000483969 SFI1A8K8P3 1242 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 TMEM232C9JQI7 657 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 IFIT3O14879 490 aaKnown RBP10.42□□□□□ -0.74
COL8A1-207ENST00000483969 EPB41L2O43491 1005 aaKnown RBP10.42□□□□□ -0.74
COL8A1-207ENST00000483969 CNMDO75829 334 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 SLC25A27O95847 323 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 NID1P14543 1247 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 ITGB7P26010 798 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 IKQ13123 557 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-207ENST00000483969 KRT32Q14532 448 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 RAET1EQ8TD07 263 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 ATG4CQ96DT6 458 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 ABHD8Q96I13 439 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 FBXO28Q9NVF7 368 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 BTBD7Q9P203 1132 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 MTMR7Q9Y216 660 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 MYH1P12882 1939 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 DOCK1Q14185 1865 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
COL8A1-207ENST00000483969 TNKSO95271 1327 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 VWA5AO00534 786 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 STRNO43815 780 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 CTGFP29279 349 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 MCM5P33992 734 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 COPB2P35606 906 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 STAT3P40763 770 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 STAT2P52630 851 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 PLS1Q14651 629 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 IFIT1BQ5T764 474 aaKnown RBP10.41□□□□□ -0.74
COL8A1-207ENST00000483969 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 CYB5R4Q7L1T6 521 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 PLEKHH3Q7Z736 793 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 TMTC2Q8N394 836 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 SHCBP1Q8NEM2 672 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 MTA3Q9BTC8 594 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 SPATC1LQ9H0A9 340 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 MROH8Q9H579 483 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
COL8A1-207ENST00000483969 PEX10O60683 326 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
COL8A1-207ENST00000483969 FLT3LGP49771 235 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 CAP1Q01518 475 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 PRKCZQ05513 592 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 TMEM132BQ14DG7 1078 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 WTAPQ15007 396 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 GPATCH4Q5T3I0 446 aaKnown RBP10.4□□□□□ -0.74
COL8A1-207ENST00000483969 KCTD1Q719H9 257 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 GPR142Q7Z601 462 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 RIOX2Q8IUF8 465 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 ALDH16A1Q8IZ83 802 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 ENAHQ8N8S7 591 aaPredicted RBP10.4□□□□□ -0.74
COL8A1-207ENST00000483969 SOCS4Q8WXH5 440 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 CHMP4CQ96CF2 233 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 NEK1Q96PY6 1258 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 MOV10L1Q9BXT6 1211 aaKnown RBP10.4□□□□□ -0.74
COL8A1-207ENST00000483969 PORCNQ9H237 461 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 GJD2Q9UKL4 321 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 PTCH2Q9Y6C5 1203 aa10.4□□□□□ -0.74
COL8A1-207ENST00000483969 SLC15A5A6NIM6 579 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 CCDC85CA6NKD9 419 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 ATP2A1O14983 1001 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 LILRB5O75023 590 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 DKK1O94907 266 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 PDHBP11177 359 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 ERCC3P19447 782 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 OAZ1P54368 228 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 SEC23AQ15436 765 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms