RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 MBOAT7Q96N66 472 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 MTMR9Q96QG7 549 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 WDR18Q9BV38 432 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 RAB34Q9BZG1 259 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 KIAA1683Q9H0B3 1180 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 DNAJC25Q9H1X3 360 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 CPVLQ9H3G5 476 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 MAP3K20Q9NYL2 800 aaKnown RBP6.11□□□□□ -1.43
COL17A1-206ENST00000483876 CCDC39Q9UFE4 941 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 DACH1Q9UI36 760 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 MTMR7Q9Y216 660 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 STK24Q9Y6E0 443 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 MYH8P13535 1937 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 SPTBN4Q9H254 2564 aa6.11□□□□□ -1.43
COL17A1-206ENST00000483876 GOLGA6L6A8MZA4 724 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 C19orf81C9J6K1 198 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 WNT7AO00755 349 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 MEIS2O14770 477 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 NEMFO60524 1076 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 CYP3A4P08684 503 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 SLURP2P0DP57 97 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 CYP2C8P10632 490 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 CDC25BP30305 580 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 CIITAP33076 1130 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 SLC16A2P36021 539 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 PBX2P40425 430 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 UBA7P41226 1012 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 USP14P54578 494 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 RTP1P59025 263 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 TPM4P67936 248 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 MORC3Q14149 939 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 CDC37Q16543 378 aaPredicted RBP6.1□□□□□ -1.43
COL17A1-206ENST00000483876 LETM2Q2VYF4 491 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 JAKMIP3Q5VZ66 844 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 HFE2Q6ZVN8 426 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 USP49Q70CQ1 688 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 LUZP1Q86V48 1076 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 ERO1BQ86YB8 467 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 DHX40Q8IX18 779 aaKnown RBP6.1□□□□□ -1.43
COL17A1-206ENST00000483876 IGSF22Q8N9C0 903 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 PRPF38AQ8NAV1 312 aaKnown RBP6.1□□□□□ -1.43
COL17A1-206ENST00000483876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.1□□□□□ -1.43
COL17A1-206ENST00000483876 RASGRP4Q8TDF6 673 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 SMARCE1Q969G3 411 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 MRFAP1L1Q96HT8 127 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 PARK7Q99497 189 aaKnown RBP6.1□□□□□ -1.43
COL17A1-206ENST00000483876 ZNF341Q9BYN7 854 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 PBX4Q9BYU1 374 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 LRRC27Q9C0I9 530 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 RANBP17Q9H2T7 1088 aaKnown RBP6.1□□□□□ -1.43
COL17A1-206ENST00000483876 FAM86C1Q9NVL1 165 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 RMND1Q9NWS8 449 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 SERTAD1Q9UHV2 236 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 RALYQ9UKM9 306 aaKnown RBP6.1□□□□□ -1.43
COL17A1-206ENST00000483876 PRR12Q9ULL5 1215 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 ATP11BQ9Y2G3 1177 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 RABGAP1Q9Y3P9 1069 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 UNC79Q9P2D8 2635 aa6.1□□□□□ -1.43
COL17A1-206ENST00000483876 WDR46O15213 610 aaKnown RBP6.09□□□□□ -1.43
COL17A1-206ENST00000483876 DCXO43602 365 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 GTPBP6O43824 516 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-206ENST00000483876 EDIL3O43854 480 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 SSTR3P32745 418 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-206ENST00000483876 EPHB4P54760 987 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 AMPD3Q01432 767 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 GHRHRQ02643 423 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 DPYDQ12882 1025 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 PPIL2Q13356 520 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 PNOCQ13519 176 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 KCNB1Q14721 858 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 CALCRLQ16602 461 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 ST3GAL2Q16842 350 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 TMEM266Q2M3C6 531 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 Q4G0T1 1027 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 SPECC1Q5M775 1068 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 RRAGBQ5VZM2 374 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 PDXDC2PQ6P474 469 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 CNNM4Q6P4Q7 775 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 C11orf57Q6ZUT1 292 aaPredicted RBP6.09□□□□□ -1.43
COL17A1-206ENST00000483876 RASGRP2Q7LDG7 609 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 ZSCAN30Q86W11 494 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 PLA2G4DQ86XP0 818 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 SLFN12Q8IYM2 578 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
COL17A1-206ENST00000483876 ACER1Q8TDN7 264 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 HLA-CQ95604 372 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 FAM20AQ96MK3 541 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 PRRX2Q99811 253 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 TMEM60Q9H2L4 133 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 AS3MTQ9HBK9 375 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 DISC1Q9NRI5 854 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 KBTBD4Q9NVX7 518 aa6.09□□□□□ -1.43
COL17A1-206ENST00000483876 MRPL11Q9Y3B7 192 aaKnown RBP6.09□□□□□ -1.43
COL17A1-206ENST00000483876 MYH4Q9Y623 1939 aa6.09□□□□□ -1.44
COL17A1-206ENST00000483876 ZFHX2Q9C0A1 2572 aaPredicted RBP6.09□□□□□ -1.44
COL17A1-206ENST00000483876 LRRC37A2A6NM11 1700 aa6.08□□□□□ -1.44
COL17A1-206ENST00000483876 ABCB11O95342 1321 aa6.08□□□□□ -1.44
COL17A1-206ENST00000483876 A0A087X0B3 334 aa6.08□□□□□ -1.44
COL17A1-206ENST00000483876 LRRC10BA6NIK2 292 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms