RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	MARCH6	O60337	910 aa		31.24	■■■□□ 2.59
TPRA1-208	ENST00000483868	YEATS4	O95619	227 aa		31.24	■■■□□ 2.59
TPRA1-208	ENST00000483868	SLC9C1	Q4G0N8	1177 aa		31.24	■■■□□ 2.59
TPRA1-208	ENST00000483868	FBXO46	Q6PJ61	603 aa	Predicted RBP	31.24	■■■□□ 2.59
TPRA1-208	ENST00000483868	CYFIP1	Q7L576	1253 aa		31.24	■■■□□ 2.59
TPRA1-208	ENST00000483868	RCOR1	Q9UKL0	485 aa		31.24	■■■□□ 2.59
TPRA1-208	ENST00000483868	MYC	P01106	439 aa	Predicted RBP	31.23	■■■□□ 2.59
TPRA1-208	ENST00000483868	TNFAIP2	Q03169	654 aa		31.23	■■■□□ 2.59
TPRA1-208	ENST00000483868	DUSP28	Q4G0W2	176 aa		31.23	■■■□□ 2.59
TPRA1-208	ENST00000483868	LRCH2	Q5VUJ6	765 aa		31.23	■■■□□ 2.59
TPRA1-208	ENST00000483868	SENP7	Q9BQF6	1050 aa		31.23	■■■□□ 2.59
TPRA1-208	ENST00000483868	TTC12	Q9H892	705 aa	Predicted RBP	31.23	■■■□□ 2.59
TPRA1-208	ENST00000483868	SPTLC2	O15270	562 aa		31.22	■■■□□ 2.59
TPRA1-208	ENST00000483868	GGPS1	O95749	300 aa		31.22	■■■□□ 2.59
TPRA1-208	ENST00000483868	BMP15	O95972	392 aa		31.22	■■■□□ 2.59
TPRA1-208	ENST00000483868	KCNV1	Q6PIU1	500 aa		31.22	■■■□□ 2.59
TPRA1-208	ENST00000483868	VAV3	Q9UKW4	847 aa		31.22	■■■□□ 2.59
TPRA1-208	ENST00000483868	FAM184B	Q9ULE4	1060 aa		31.22	■■■□□ 2.59
TPRA1-208	ENST00000483868	GAS7	O60861	476 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	TEC	P42680	631 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	SLFN12	Q8IYM2	578 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	SPATA32	Q96LK8	384 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	FBXO2	Q9UK22	296 aa	Predicted RBP	31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	GNE	Q9Y223	722 aa	Known RBP	31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	LAD1	O00515	517 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	SEPT4	O43236	478 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	FARP2	O94887	1054 aa	Predicted RBP	31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	IRX5	P78411	483 aa	Predicted RBP	31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	SP4	Q02446	784 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	SPIRE1	Q08AE8	756 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	CELF3	Q5SZQ8	465 aa	Known RBP	31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	CLIC6	Q96NY7	704 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	RIT2	Q99578	217 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	PCDHA12	Q9UN75	941 aa		31.21	■■■□□ 2.59
TPRA1-208	ENST00000483868	VWA3A	A6NCI4	1184 aa		31.2	■■■□□ 2.58
TPRA1-208	ENST00000483868	CCNE2	O96020	404 aa		31.2	■■■□□ 2.58
TPRA1-208	ENST00000483868	AKR1A1	P14550	325 aa		31.2	■■■□□ 2.58
TPRA1-208	ENST00000483868	PRPH	P41219	470 aa		31.2	■■■□□ 2.58
TPRA1-208	ENST00000483868	MTFR1	Q15390	333 aa		31.2	■■■□□ 2.58
TPRA1-208	ENST00000483868	PKN2	Q16513	984 aa	Known RBP	31.2	■■■□□ 2.58
TPRA1-208	ENST00000483868	UNC45A	Q9H3U1	944 aa		31.2	■■■□□ 2.58
TPRA1-208	ENST00000483868	NFASC	O94856	1347 aa		31.19	■■■□□ 2.58
TPRA1-208	ENST00000483868	ARHGAP1	Q07960	439 aa		31.19	■■■□□ 2.58
TPRA1-208	ENST00000483868	NEDD9	Q14511	834 aa		31.19	■■■□□ 2.58
TPRA1-208	ENST00000483868	ARL6IP4	Q66PJ3	421 aa	Known RBP	31.19	■■■□□ 2.58
TPRA1-208	ENST00000483868	SDF4	Q9BRK5	362 aa		31.19	■■■□□ 2.58
TPRA1-208	ENST00000483868	SCAND2P	Q9GZW5	306 aa	Predicted RBP	31.19	■■■□□ 2.58
TPRA1-208	ENST00000483868	TBC1D22B	Q9NU19	505 aa		31.19	■■■□□ 2.58
TPRA1-208	ENST00000483868	POTEM	A6NI47	508 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	CHMP2A	O43633	222 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	B3GNT9	Q6UX72	402 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	DTHD1	Q6ZMT9	781 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	DHX37	Q8IY37	1157 aa	Known RBP	31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	TEKT3	Q9BXF9	490 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	JPH1	Q9HDC5	661 aa	Predicted RBP	31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	EML1	O00423	815 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	HSDL1	Q3SXM5	330 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	CLEC17A	Q6ZS10	378 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	KCNG4	Q8TDN1	519 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	UNC93B1	Q9H1C4	597 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	MLXIP	Q9HAP2	919 aa		31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	SRPRB	Q9Y5M8	271 aa	Known RBP	31.18	■■■□□ 2.58
TPRA1-208	ENST00000483868	DYNC1LI2	O43237	492 aa	Predicted RBP	31.17	■■■□□ 2.58
TPRA1-208	ENST00000483868	PPP6R2	O75170	966 aa		31.17	■■■□□ 2.58
TPRA1-208	ENST00000483868	METTL7B	Q6UX53	244 aa		31.17	■■■□□ 2.58
TPRA1-208	ENST00000483868	HMX1	Q9NP08	348 aa	Predicted RBP	31.17	■■■□□ 2.58
TPRA1-208	ENST00000483868	SLC9A2	Q9UBY0	812 aa		31.17	■■■□□ 2.58
TPRA1-208	ENST00000483868	PCDHA7	Q9UN72	937 aa		31.17	■■■□□ 2.58
TPRA1-208	ENST00000483868	MORC2	Q9Y6X9	1032 aa	Predicted RBP	31.17	■■■□□ 2.58
TPRA1-208	ENST00000483868	PP2D1	A8MPX8	630 aa		31.16	■■■□□ 2.58
TPRA1-208	ENST00000483868	CDC25A	P30304	524 aa		31.16	■■■□□ 2.58
TPRA1-208	ENST00000483868	FXR2	P51116	673 aa	Known RBP eCLIP	31.16	■■■□□ 2.58
TPRA1-208	ENST00000483868	SPECC1	Q5M775	1068 aa		31.16	■■■□□ 2.58
TPRA1-208	ENST00000483868	GH1	P01241	217 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	ME1	P48163	572 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	PPP2R5C	Q13362	524 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	AXDND1	Q5T1B0	1012 aa	Predicted RBP	31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	TLK2	Q86UE8	772 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	KRI1	Q8N9T8	703 aa	Known RBP	31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	CSRNP2	Q9H175	543 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	TPRN	Q4KMQ1	711 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	NCAPH2	Q6IBW4	605 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	IGSF22	Q8N9C0	903 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	GIMAP8	Q8ND71	665 aa	Predicted RBP	31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	OR6J1	Q8NGC5	347 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	SPATA33	Q96N06	139 aa		31.15	■■■□□ 2.58
TPRA1-208	ENST00000483868	DNAH12	Q6ZR08	3092 aa		31.14	■■■□□ 2.58
TPRA1-208	ENST00000483868	NKRF	O15226	690 aa	Known RBP eCLIP	31.14	■■■□□ 2.58
TPRA1-208	ENST00000483868	DUSP11	O75319	330 aa	Known RBP	31.14	■■■□□ 2.58
TPRA1-208	ENST00000483868	AFG1L	Q8WV93	481 aa		31.14	■■■□□ 2.58
TPRA1-208	ENST00000483868	FERMT2	Q96AC1	680 aa		31.14	■■■□□ 2.58
TPRA1-208	ENST00000483868	MCOLN1	Q9GZU1	580 aa		31.14	■■■□□ 2.58
TPRA1-208	ENST00000483868	DDX20	Q9UHI6	824 aa	Known RBP	31.14	■■■□□ 2.58
TPRA1-208	ENST00000483868	ACTR2	P61160	394 aa		31.13	■■■□□ 2.57
TPRA1-208	ENST00000483868	USP49	Q70CQ1	688 aa		31.13	■■■□□ 2.57
TPRA1-208	ENST00000483868	ZNF333	Q96JL9	665 aa		31.13	■■■□□ 2.57
TPRA1-208	ENST00000483868	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	31.13	■■■□□ 2.57	9e-6	■■■■■ 32.4
TPRA1-208	ENST00000483868	PGK1	P00558	417 aa		31.12	■■■□□ 2.57
TPRA1-208	ENST00000483868	LAMC2	Q13753	1193 aa		31.12	■■■□□ 2.57
TPRA1-208	ENST00000483868	TMEM266	Q2M3C6	531 aa		31.12	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms