RNA–Protein interactions for RNA: ENST00000483683.1

COL4A2-208, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-208ENST00000483683 CDHR1Q96JP9 859 aa16.94■□□□□ 0.3
COL4A2-208ENST00000483683 RNPC3Q96LT9 517 aaKnown RBP16.94■□□□□ 0.3
COL4A2-208ENST00000483683 GPR20Q99678 358 aa16.94■□□□□ 0.3
COL4A2-208ENST00000483683 ALG1Q9BT22 464 aa16.94■□□□□ 0.3
COL4A2-208ENST00000483683 KATNAL1Q9BW62 490 aa16.94■□□□□ 0.3
COL4A2-208ENST00000483683 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
COL4A2-208ENST00000483683 TMEM260Q9NX78 707 aa16.94■□□□□ 0.3
COL4A2-208ENST00000483683 DOCK5Q9H7D0 1870 aa16.94■□□□□ 0.3
COL4A2-208ENST00000483683 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 SEC24BO95487 1268 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 LGALS2P05162 132 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 SREBF1P36956 1147 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 SMAD3P84022 425 aaKnown RBP16.93■□□□□ 0.3
COL4A2-208ENST00000483683 HIC1Q14526 733 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 FAM109BQ6ICB4 259 aaPredicted RBP16.93■□□□□ 0.3
COL4A2-208ENST00000483683 PSRC1Q6PGN9 363 aaPredicted RBP16.93■□□□□ 0.3
COL4A2-208ENST00000483683 C7orf31Q8N865 590 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 CYP2W1Q8TAV3 490 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 CRYGNQ8WXF5 182 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 MXRA8Q9BRK3 442 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 EHMT1Q9H9B1 1298 aa16.93■□□□□ 0.3
COL4A2-208ENST00000483683 H3BRB1 525 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 HOXC8P31273 242 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 RBL2Q08999 1139 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 JAKMIP3Q5VZ66 844 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 Q7L0L9 218 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 DEFB123Q8N688 67 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 GIMAP8Q8ND71 665 aaPredicted RBP16.92■□□□□ 0.3
COL4A2-208ENST00000483683 HERVK_113Q902F9 699 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 DHX38Q92620 1227 aaKnown RBP16.92■□□□□ 0.3
COL4A2-208ENST00000483683 SLC26A6Q9BXS9 759 aa16.92■□□□□ 0.3
COL4A2-208ENST00000483683 TUT1Q9H6E5 874 aaKnown RBP16.92■□□□□ 0.3
COL4A2-208ENST00000483683 TRIP12Q14669 1992 aaPredicted RBP16.91■□□□□ 0.3
COL4A2-208ENST00000483683 GSTTP1A0A1W2PQM5 241 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 MEIS1O00470 390 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 NOP56O00567 594 aaKnown RBP16.91■□□□□ 0.3
COL4A2-208ENST00000483683 FGBP02675 491 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 ZNF200P98182 395 aaPredicted RBP16.91■□□□□ 0.3
COL4A2-208ENST00000483683 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
COL4A2-208ENST00000483683 MTMR1Q13613 665 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 RPUSD2Q8IZ73 545 aaKnown RBP16.91■□□□□ 0.3
COL4A2-208ENST00000483683 CCDC12Q8WUD4 166 aaPredicted RBP16.91■□□□□ 0.3
COL4A2-208ENST00000483683 C6orf50Q9HD87 102 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 KCNH7Q9NS40 1196 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 MTMR10Q9NXD2 777 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 NOD1Q9Y239 953 aa16.91■□□□□ 0.3
COL4A2-208ENST00000483683 TET1Q8NFU7 2136 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.9■□□□□ 0.3
COL4A2-208ENST00000483683 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.9■□□□□ 0.3
COL4A2-208ENST00000483683 CYP3A4P08684 503 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 IQCF3P0C7M6 154 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 ARP10275 920 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 ARHGAP4P98171 946 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 BFSP2Q13515 415 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 GPNMBQ14956 572 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 TRIM71Q2Q1W2 868 aaKnown RBP16.9■□□□□ 0.3
COL4A2-208ENST00000483683 TRIM50Q86XT4 487 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 CAGE1Q8TC20 777 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 WNT8BQ93098 351 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 RNPEPQ9H4A4 650 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 SH3GLB2Q9NR46 395 aa16.9■□□□□ 0.3
COL4A2-208ENST00000483683 CXXC1Q9P0U4 656 aaPredicted RBP16.9■□□□□ 0.3
COL4A2-208ENST00000483683 SCN5AQ14524 2016 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 GNA11P29992 359 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 SP4Q02446 784 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
COL4A2-208ENST00000483683 STK3Q13188 491 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 PTK7Q13308 1070 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 MCTP2Q6DN12 878 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 REXO1Q8N1G1 1221 aaKnown RBP16.89■□□□□ 0.29
COL4A2-208ENST00000483683 RETREG2Q8NC44 543 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 AFAP1L1Q8TED9 768 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 SEPT1Q8WYJ6 367 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 PKD2L1Q9P0L9 805 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 VPS54Q9P1Q0 977 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 TPCN1Q9ULQ1 816 aa16.89■□□□□ 0.29
COL4A2-208ENST00000483683 IGLV3-22A0A075B6J6 115 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 FAM86B1E9PN63 330 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 EDIL3O43854 480 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 PFKFB2O60825 505 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 EIF5BO60841 1220 aaKnown RBP16.88■□□□□ 0.29
COL4A2-208ENST00000483683 PFKMP08237 780 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 FAM86B2P0C5J1 330 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 SMIM10L2AP0DMW4 78 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 SMIM10L2BP0DMW5 78 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 RFC2P35250 354 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 TCF7P36402 384 aaPredicted RBP16.88■□□□□ 0.29
COL4A2-208ENST00000483683 SCRN1Q12765 414 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 ITGB3BPQ13352 177 aaPredicted RBP16.88■□□□□ 0.29
COL4A2-208ENST00000483683 UTP14CQ5TAP6 766 aaKnown RBP16.88■□□□□ 0.29
COL4A2-208ENST00000483683 TRAF7Q6Q0C0 670 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 NIPA1Q7RTP0 329 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 OTOP2Q7RTS6 562 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 SERINC5Q86VE9 423 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 CCDC148Q8NFR7 591 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 RASGRP4Q8TDF6 673 aa16.88■□□□□ 0.29
COL4A2-208ENST00000483683 AGO4Q9HCK5 861 aaKnown RBP16.88■□□□□ 0.29
COL4A2-208ENST00000483683 NFASCO94856 1347 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms