RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 LRRC63Q05C16 580 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 RBL2Q08999 1139 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 TRIM14Q14142 442 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 LRCH2Q5VUJ6 765 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 B3GNT9Q6UX72 402 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 NIPA1Q7RTP0 329 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 PPFIBP1Q86W92 1011 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 MXRA8Q9BRK3 442 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 RAVER2Q9HCJ3 691 aaKnown RBP14.74□□□□□ -0.05
CPNE1-225ENST00000483495 TUFT1Q9NNX1 390 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 VWA5AO00534 786 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 CCP110O43303 1012 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 MFAP3LO75121 409 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 ZBED4O75132 1171 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 GYPCP04921 128 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 SSBP05455 408 aaKnown RBP eCLIP14.74□□□□□ -0.05
CPNE1-225ENST00000483495 TPM2P07951 284 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 FECHP22830 423 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 PSMC6P62333 389 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 SUPT20HL1Q3ZLR7 823 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 FAM26FQ5R3K3 315 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 KRT26Q7Z3Y9 468 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 CCDC51Q96ER9 411 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 PPP1R13BQ96KQ4 1090 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 WDR11Q9BZH6 1224 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 FHDC1Q9C0D6 1143 aaPredicted RBP14.74□□□□□ -0.05
CPNE1-225ENST00000483495 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
CPNE1-225ENST00000483495 ADAMTS5Q9UNA0 930 aa14.74□□□□□ -0.05
CPNE1-225ENST00000483495 ALAS1P13196 640 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 UBXN2AP68543 259 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 UBXN1Q04323 297 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 PTPN14Q15678 1187 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 CEP135Q66GS9 1140 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 CNGA4Q8IV77 575 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 MYOCDQ8IZQ8 938 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 CPXCR1Q8N123 301 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 MB21D1Q8N884 522 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 SYTL5Q8TDW5 730 aaPredicted RBP14.73□□□□□ -0.05
CPNE1-225ENST00000483495 RIT2Q99578 217 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 TUBGCP2Q9BSJ2 902 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 NAA15Q9BXJ9 866 aaKnown RBP14.73□□□□□ -0.05
CPNE1-225ENST00000483495 ZHX2Q9Y6X8 837 aa14.73□□□□□ -0.05
CPNE1-225ENST00000483495 SBF1O95248 1867 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 KIF2AO00139 706 aaPredicted RBP14.72□□□□□ -0.05
CPNE1-225ENST00000483495 GAS7O60861 476 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 EYA4O95677 639 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 FGFR1OPO95684 399 aaKnown RBP14.72□□□□□ -0.05
CPNE1-225ENST00000483495 ARP10275 920 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 ITGB5P18084 799 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 DNM2P50570 870 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 OAZ1P54368 228 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 ZCWPW2Q504Y3 356 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 MUM1L1Q5H9M0 696 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 PCNX4Q63HM2 1172 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 REPS2Q8NFH8 660 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 MYRIPQ8NFW9 859 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.72□□□□□ -0.052e-6■□□□□ 10.3
CPNE1-225ENST00000483495 CNOT6LQ96LI5 555 aaKnown RBP14.72□□□□□ -0.05
CPNE1-225ENST00000483495 ZNF577Q9BSK1 485 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 SLITRK3O94933 977 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 TUBB4AP04350 444 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 CASP14P31944 242 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 PABPC4Q13310 644 aaKnown RBP eCLIP14.72□□□□□ -0.054e-7■■■□□ 15.8
CPNE1-225ENST00000483495 GIT2Q14161 759 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 LRRC55Q6ZSA7 311 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 GLIS3Q8NEA6 775 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 ATG4CQ96DT6 458 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 ADARB2Q9NS39 739 aaKnown RBP14.72□□□□□ -0.05
CPNE1-225ENST00000483495 UBIAD1Q9Y5Z9 338 aa14.72□□□□□ -0.05
CPNE1-225ENST00000483495 PARP14Q460N5 1801 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 PHIPQ8WWQ0 1821 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 NPHP3-ACAD11A0A0J9YXS1 232 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 IPO5O00410 1097 aaKnown RBP14.71□□□□□ -0.05
CPNE1-225ENST00000483495 TPM1P09493 284 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 DSG3P32926 999 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 FXR1P51114 621 aaKnown RBP eCLIP14.71□□□□□ -0.05
CPNE1-225ENST00000483495 HMGCS2P54868 508 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 RPS6P62753 249 aaKnown RBP14.71□□□□□ -0.05
CPNE1-225ENST00000483495 CYP4A11Q02928 519 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 CREBRFQ8IUR6 639 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 TEKT3Q9BXF9 490 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 RGL1Q9NZL6 768 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 FZD1Q9UP38 647 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 AFG3L2Q9Y4W6 797 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.05
CPNE1-225ENST00000483495 PAXBP1Q9Y5B6 917 aa14.71□□□□□ -0.05
CPNE1-225ENST00000483495 ATP2A1O14983 1001 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 USP2O75604 605 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-225ENST00000483495 DDNO94850 711 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-225ENST00000483495 KIF20AO95235 890 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 GTF2F1P35269 517 aaKnown RBP eCLIP14.7□□□□□ -0.061e-9■■■■□ 19.4
CPNE1-225ENST00000483495 LRRC41Q15345 812 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 EPHA7Q15375 998 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 HERC4Q5GLZ8 1057 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-225ENST00000483495 SH3D19Q5HYK7 790 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 MIIPQ5JXC2 388 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 IL31RAQ8NI17 732 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 TSG101Q99816 390 aa14.7□□□□□ -0.06
CPNE1-225ENST00000483495 UNC45AQ9H3U1 944 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms