RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TOX2Q96NM4 488 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 AGO4Q9HCK5 861 aaKnown RBP23.79■■□□□ 1.4
SEC13-217ENST00000482647 PKD2L1Q9P0L9 805 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 MROH7Q68CQ1 1323 aa23.79■■□□□ 1.4
SEC13-217ENST00000482647 PQBP1O60828 265 aaKnown RBP23.78■■□□□ 1.4
SEC13-217ENST00000482647 ARP10275 920 aa23.78■■□□□ 1.4
SEC13-217ENST00000482647 HOXD8P13378 290 aaPredicted RBP23.78■■□□□ 1.4
SEC13-217ENST00000482647 SETQ01105 290 aaPredicted RBP23.78■■□□□ 1.4
SEC13-217ENST00000482647 KRT40Q6A162 431 aa23.78■■□□□ 1.4
SEC13-217ENST00000482647 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
SEC13-217ENST00000482647 OXER1Q8TDS5 423 aa23.78■■□□□ 1.4
SEC13-217ENST00000482647 C8orf76Q96K31 380 aa23.78■■□□□ 1.4
SEC13-217ENST00000482647 SDF4Q9BRK5 362 aa23.78■■□□□ 1.4
SEC13-217ENST00000482647 IGLV3-22A0A075B6J6 115 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 DCDC2CA8MYV0 355 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 MMP1P03956 469 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 FOSBP53539 338 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 SAFBQ15424 915 aaKnown RBP eCLIP23.77■■□□□ 1.4
SEC13-217ENST00000482647 PRR16Q569H4 304 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 GPR20Q99678 358 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 KIF3AQ9Y496 699 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 GRIN2DO15399 1336 aa23.77■■□□□ 1.4
SEC13-217ENST00000482647 JPH1Q9HDC5 661 aaPredicted RBP23.76■■□□□ 1.39
SEC13-217ENST00000482647 PRKAG2Q9UGJ0 569 aa23.76■■□□□ 1.39
SEC13-217ENST00000482647 CHMP4BP1P59074 171 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 SP4Q02446 784 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 INF2Q27J81 1249 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 NBPF20Q3BBV1 942 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 PRPF38BQ5VTL8 546 aaKnown RBP23.75■■□□□ 1.39
SEC13-217ENST00000482647 NFRKBQ6P4R8 1299 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 PIK3AP1Q6ZUJ8 805 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 DIS3L2Q8IYB7 885 aaKnown RBP23.75■■□□□ 1.39
SEC13-217ENST00000482647 KAT2BQ92831 832 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 KATNAL1Q9BW62 490 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 ZMYND8Q9ULU4 1186 aaPredicted RBP23.75■■□□□ 1.39
SEC13-217ENST00000482647 NFASCO94856 1347 aa23.75■■□□□ 1.39
SEC13-217ENST00000482647 CYP3A7-CYP3A51PA0A087WV96 503 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 BTBD18B2RXH4 712 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 IPO5O00410 1097 aaKnown RBP23.74■■□□□ 1.39
SEC13-217ENST00000482647 TLR3O15455 904 aaKnown RBP23.74■■□□□ 1.39
SEC13-217ENST00000482647 EDIL3O43854 480 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 F2P00734 622 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 ZNF286BP0CG31 522 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 CYP3A7P24462 503 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 NR5A1Q13285 461 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 ITGB3BPQ13352 177 aaPredicted RBP23.74■■□□□ 1.39
SEC13-217ENST00000482647 FBXO18Q8NFZ0 1043 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 SEPT1Q8WYJ6 367 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 ZNF577Q9BSK1 485 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 SLC9A2Q9UBY0 812 aa23.74■■□□□ 1.39
SEC13-217ENST00000482647 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.74■■□□□ 1.39
SEC13-217ENST00000482647 CLTBP09497 229 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 GUCY1B3Q02153 619 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 FAAP100Q0VG06 881 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 Q4G0T1 1027 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 FAM47CQ5HY64 1035 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 MOXD1Q6UVY6 613 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 NEK8Q86SG6 692 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 FAM126BQ8IXS8 530 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 TNFRSF25Q93038 417 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 NAP1L4Q99733 375 aaKnown RBP23.73■■□□□ 1.39
SEC13-217ENST00000482647 PRDM5Q9NQX1 630 aaPredicted RBP23.73■■□□□ 1.39
SEC13-217ENST00000482647 TBC1D22BQ9NU19 505 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 TMEM39AQ9NV64 488 aa23.73■■□□□ 1.39
SEC13-217ENST00000482647 LGALS2P05162 132 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 SYN1P17600 705 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 PSEN2P49810 448 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 PTPN11Q06124 597 aaPredicted RBP23.72■■□□□ 1.39
SEC13-217ENST00000482647 MFSD10Q14728 455 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 KIAA0753Q2KHM9 967 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 LETM2Q2VYF4 491 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 LENG9Q96B70 501 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 C16orf70Q9BSU1 422 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 SMC3Q9UQE7 1217 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 TELO2Q9Y4R8 837 aa23.72■■□□□ 1.39
SEC13-217ENST00000482647 CEP290O15078 2479 aa23.71■■□□□ 1.39
SEC13-217ENST00000482647 GSTTP1A0A1W2PQM5 241 aa23.71■■□□□ 1.39
SEC13-217ENST00000482647 H3BRB1 525 aa23.71■■□□□ 1.39
SEC13-217ENST00000482647 TCF7P36402 384 aaPredicted RBP23.71■■□□□ 1.39
SEC13-217ENST00000482647 UTP14CQ5TAP6 766 aaKnown RBP23.71■■□□□ 1.39
SEC13-217ENST00000482647 C7orf31Q8N865 590 aa23.71■■□□□ 1.39
SEC13-217ENST00000482647 MBOAT7Q96N66 472 aa23.71■■□□□ 1.39
SEC13-217ENST00000482647 TUT1Q9H6E5 874 aaKnown RBP23.71■■□□□ 1.39
SEC13-217ENST00000482647 PDLIM7Q9NR12 457 aa23.71■■□□□ 1.39
SEC13-217ENST00000482647 ZNF215Q9UL58 517 aaPredicted RBP23.71■■□□□ 1.39
SEC13-217ENST00000482647 HAS3O00219 553 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 MSH4O15457 936 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 DHX15O43143 795 aaKnown RBP23.7■■□□□ 1.38
SEC13-217ENST00000482647 TDP2O95551 362 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 CD4P01730 458 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 SUPT20HL2P0C7V6 817 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 GCFC2P16383 781 aaKnown RBP23.7■■□□□ 1.38
SEC13-217ENST00000482647 ACTR2P61160 394 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 CUL4AQ13619 759 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 EARS2Q5JPH6 523 aaKnown RBP23.7■■□□□ 1.38
SEC13-217ENST00000482647 PPP4R3AQ6IN85 833 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 UIMC1Q96RL1 719 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 TRPV6Q9H1D0 765 aa23.7■■□□□ 1.38
SEC13-217ENST00000482647 DDX25Q9UHL0 483 aaKnown RBP23.7■■□□□ 1.38
SEC13-217ENST00000482647 KIAA0355O15063 1070 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms